RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TRIM25Q14258 630 aaKnown RBP8.34□□□□□ -1.07
SNX13-201ENST00000409076 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 PCID2Q5JVF3 399 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 MARC1Q5VT66 337 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 SLC2A7Q6PXP3 512 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 ARL10Q8N8L6 244 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 C12orf43Q96C57 262 aaKnown RBP8.34□□□□□ -1.07
SNX13-201ENST00000409076 HMCESQ96FZ2 354 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 NAT9Q9BTE0 207 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 KATNAL1Q9BW62 490 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 DRC3Q9H069 523 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 SMURF2Q9HAU4 748 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 ZBTB26Q9HCK0 441 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 RASSF1Q9NS23 344 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 CACNA2D2Q9NY47 1150 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 KIAA1257Q9ULG3 409 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 FADS3Q9Y5Q0 445 aa8.34□□□□□ -1.07
SNX13-201ENST00000409076 KIF13BQ9NQT8 1826 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 NINQ8N4C6 2090 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 RSL1D1O76021 490 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 LTA4HP09960 611 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 PROZP22891 400 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 FASP25445 335 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 OR1E1P30953 314 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 PTPN9P43378 593 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 RAD23AP54725 363 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 PRKCQQ04759 706 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 INPP5AQ14642 412 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 MFSD10Q14728 455 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 KLHL35Q6PF15 583 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 IL27RAQ6UWB1 636 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 RNF168Q8IYW5 571 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 SLC22A15Q8IZD6 547 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 LSMEM2Q8N112 164 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 PCYOX1LQ8NBM8 494 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 SMG8Q8ND04 991 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 OR7D4Q8NG98 312 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ACMSDQ8TDX5 336 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 TWIST2Q8WVJ9 160 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ITFG2Q969R8 447 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 C19orf60Q96EN9 201 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 TEKT5Q96M29 485 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 EML4Q9HC35 981 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 INTS7Q9NVH2 962 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 C6orf203Q9P0P8 240 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 EIF2B4Q9UI10 523 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 ST3GAL5Q9UNP4 418 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 UNC80Q8N2C7 3258 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ZNF189O75820 626 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 IPO13O94829 963 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 MMP3P08254 477 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 CDK4P11802 303 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ZNF37AP17032 561 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 HARS2P49590 506 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 EIF2B2P49770 351 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 SEPHS1P49903 392 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 NR1H2P55055 460 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 UFM1P61960 85 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 IL5RAQ01344 420 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 POU4F1Q01851 419 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 TCEA2Q15560 299 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 UGP2Q16851 508 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ALFQ53S48 1182 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 OVOS1Q6IE37 1185 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 GCNT7Q6ZNI0 430 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 FBXO39Q8N4B4 442 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ZNF513Q8N8E2 541 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 GLMNQ92990 594 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 FAM162AQ96A26 154 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 PRICKLE1Q96MT3 831 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 FAM193BQ96PV7 902 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 MRPS26Q9BYN8 205 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 CXorf21Q9HAI6 301 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 SMOXQ9NWM0 555 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 CHCHD3Q9NX63 227 aaKnown RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 GALPQ9UBC7 116 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 FETUBQ9UGM5 382 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 INVSQ9Y283 1065 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 VWA7Q9Y334 891 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 RNF11Q9Y3C5 154 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 IGKV6D-21A0A0A0MT36 114 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 TTC36A6NLP5 189 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 ZNF195O14628 629 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 HTRA2O43464 458 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 NBNO60934 754 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 NIPSNAP2O75323 286 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 DAB1O75553 588 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 OR4F21O95013 312 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 OCM2P0CE71 109 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 OCMP0CE72 109 aaPredicted RBP8.33□□□□□ -1.08
SNX13-201ENST00000409076 SLC2A4P14672 509 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 PSMB9P28065 219 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 NPY2RP49146 381 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 FAM189BP81408 668 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 UBE3AQ05086 875 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 CD300CQ08708 224 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 INCA1Q0VD86 236 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 MYBPC3Q14896 1274 aa8.33□□□□□ -1.08
SNX13-201ENST00000409076 NR1D2Q14995 579 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms