RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CTAGE6Q86UF2 777 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 CTAGE4Q8IX94 777 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 RGL4Q8IZJ4 473 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 CEP112Q8N8E3 955 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 BLOC1S5Q8TDH9 187 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 CASS4Q9NQ75 786 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 SLCO1B1Q9Y6L6 691 aa29.36■■■□□ 2.29
USP42-202ENST00000404008 AURKAO14965 403 aa29.35■■■□□ 2.29
USP42-202ENST00000404008 ANKRD22Q5VYY1 191 aa29.35■■■□□ 2.29
USP42-202ENST00000404008 C1orf216Q8TAB5 229 aa29.35■■■□□ 2.29
USP42-202ENST00000404008 EID2BQ96D98 161 aa29.35■■■□□ 2.29
USP42-202ENST00000404008 LENG8Q96PV6 779 aaPredicted RBP29.35■■■□□ 2.29
USP42-202ENST00000404008 PIH1D1Q9NWS0 290 aaKnown RBP29.35■■■□□ 2.29
USP42-202ENST00000404008 PILRBQ9UKJ0 227 aa29.35■■■□□ 2.29
USP42-202ENST00000404008 LAMA1P25391 3075 aa29.35■■■□□ 2.29
USP42-202ENST00000404008 DNALI1O14645 258 aaPredicted RBP29.34■■■□□ 2.29
USP42-202ENST00000404008 RECQL5O94762 991 aaPredicted RBP29.34■■■□□ 2.29
USP42-202ENST00000404008 EPN2O95208 641 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 HNRNPA2B1P22626 353 aaKnown RBP29.34■■■□□ 2.29
USP42-202ENST00000404008 RNASEH2BQ5TBB1 312 aaKnown RBP29.34■■■□□ 2.29
USP42-202ENST00000404008 PEAR1Q5VY43 1037 aaPredicted RBP29.34■■■□□ 2.29
USP42-202ENST00000404008 CYP2U1Q7Z449 544 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 TMC3Q7Z5M5 1100 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 PPIL6Q8IXY8 311 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 DNAAF3Q8N9W5 541 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 SERAC1Q96JX3 654 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 KLF6Q99612 283 aaPredicted RBP29.34■■■□□ 2.29
USP42-202ENST00000404008 C1QTNF7Q9BXJ2 289 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 GPR63Q9BZJ6 419 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 MIR1-1HGQ9H1L0 117 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 L2HGDHQ9H9P8 463 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 FZD3Q9NPG1 666 aa29.34■■■□□ 2.29
USP42-202ENST00000404008 ATXN2Q99700 1313 aaKnown RBP29.34■■■□□ 2.29
USP42-202ENST00000404008 SDK1Q7Z5N4 2213 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 PRAMEF26H0Y7S4 382 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 RAD51BO15315 384 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 TMEM63AO94886 807 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 ETV3P41162 512 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 NHLH1Q02575 133 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 GLT6D1Q7Z4J2 308 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 TECPR1Q7Z6L1 1165 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 RAVER1Q8IY67 606 aaKnown RBP29.33■■■□□ 2.29
USP42-202ENST00000404008 TTC30BQ8N4P2 665 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 MMGT1Q8N4V1 131 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 NAT8LQ8N9F0 302 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 BRSK1Q8TDC3 778 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 CENPTQ96BT3 561 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 DTD2Q96FN9 168 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 TMEM74BQ9NUR3 256 aa29.33■■■□□ 2.29
USP42-202ENST00000404008 ZNF106Q9H2Y7 1883 aaKnown RBP29.33■■■□□ 2.29
USP42-202ENST00000404008 GOLGA8CPA6NN73 597 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 PROB1E7EW31 1015 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 WNT9AO14904 365 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 SLC4A1P02730 911 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 TPH1P17752 444 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 AKT2P31751 481 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 Q6ZVL8 140 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 ZNF534Q76KX8 674 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 PCGF5Q86SE9 256 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 SYT12Q8IV01 421 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 TP53I13Q8NBR0 393 aaPredicted RBP29.32■■■□□ 2.28
USP42-202ENST00000404008 TMEM145Q8NBT3 493 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 NOA1Q8NC60 698 aaKnown RBP29.32■■■□□ 2.28
USP42-202ENST00000404008 DENND6BQ8NEG7 585 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 ERP44Q9BS26 406 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 CARD6Q9BX69 1037 aa29.32■■■□□ 2.28
USP42-202ENST00000404008 EFCAB8A8MWE9 144 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 HOXD12P35452 270 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 HMGCLP35914 325 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 DPP6P42658 865 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 IZUMO3Q5VZ72 239 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 C8orf74Q6P047 294 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 RFLNAQ6ZTI6 216 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 ZCCHC9Q8N567 271 aaKnown RBP29.31■■■□□ 2.28
USP42-202ENST00000404008 MCUQ8NE86 351 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 PIGKQ92643 395 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 NUS1Q96E22 293 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 SNF8Q96H20 258 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 SLC6A18Q96N87 628 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 MYOCQ99972 504 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 TRIM31Q9BZY9 425 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 TM9SF3Q9HD45 589 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 KCTD5Q9NXV2 234 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 PCDHGA5Q9Y5G8 931 aa29.31■■■□□ 2.28
USP42-202ENST00000404008 GON4LQ3T8J9 2241 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 AP3B1O00203 1094 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 LMNAP02545 664 aaKnown RBP29.3■■■□□ 2.28
USP42-202ENST00000404008 SPINT3P49223 89 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 SARNPP82979 210 aaKnown RBP29.3■■■□□ 2.28
USP42-202ENST00000404008 LRRC14Q15048 493 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 TAF1AQ15573 450 aaPredicted RBP29.3■■■□□ 2.28
USP42-202ENST00000404008 WSCD2Q2TBF2 565 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 LRRC8BQ6P9F7 803 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 HOOK3Q86VS8 718 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 LRRC1Q9BTT6 524 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 MBNL1Q9NR56 388 aaKnown RBP29.3■■■□□ 2.28
USP42-202ENST00000404008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP29.3■■■□□ 2.28
USP42-202ENST00000404008 PKD2L2Q9NZM6 624 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 ARL5AQ9Y689 179 aa29.3■■■□□ 2.28
USP42-202ENST00000404008 TP53BP1Q12888 1972 aaPredicted RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms