RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 TMC3Q7Z5M5 1100 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 PDIK1LQ8N165 341 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 AGGF1Q8N302 714 aaeCLIP33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 ZCCHC9Q8N567 271 aaKnown RBP33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 IL22Q9GZX6 179 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 KCTD3Q9Y597 815 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 MAP3K13O43283 966 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 BANF1O75531 89 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 C1SP09871 688 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 MAT2AP31153 395 aaKnown RBP33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 RPS21P63220 83 aaKnown RBP33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 TAF1AQ15573 450 aaPredicted RBP33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 KIAA1161Q6NSJ0 714 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 HSD11B1LQ7Z5J1 315 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 HORMAD1Q86X24 394 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 CBARPQ8N350 705 aaPredicted RBP33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 DEFB119Q8N690 84 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 KLK6Q92876 244 aa33.3■■■□□ 2.92
CSNK1E-204ENST00000403904 LDB2O43679 373 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 RPP40O75818 363 aaKnown RBP33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 CRTAMO95727 393 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 ARL4CP56559 192 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 RPL6Q02878 288 aaKnown RBP33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 BBS9Q3SYG4 887 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 SLC36A4Q6YBV0 504 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 ZSCAN32Q9NX65 697 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 CEP192Q8TEP8 1941 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 VPS13AQ96RL7 3174 aa33.29■■■□□ 2.92
CSNK1E-204ENST00000403904 SDR42E2A6NKP2 422 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 C2orf81A6NN90 581 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 PPFIA2O75334 1257 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 HMGCLP35914 325 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 STC1P52823 247 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 DHX9Q08211 1270 aaKnown RBP33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 CUL1Q13616 776 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 PTPRCAPQ14761 206 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 ACOX1Q15067 660 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 TMEM259Q4ZIN3 620 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 GAB3Q8WWW8 586 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 SIGLEC10Q96LC7 697 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 BPIFA1Q9NP55 256 aa33.28■■■□□ 2.92
CSNK1E-204ENST00000403904 CCDC78A2IDD5 438 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 LZTS3O60299 673 aaPredicted RBP33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 GM2AP17900 193 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 ADRA1DP25100 572 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 ECHS1P30084 290 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 PCID2Q5JVF3 399 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 CASC4Q6P4E1 433 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 RFLNAQ6ZTI6 216 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 RANBP9Q96S59 729 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 CHRAC1Q9NRG0 131 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 TCAF1Q9Y4C2 921 aa33.27■■■□□ 2.92
CSNK1E-204ENST00000403904 SCN8AQ9UQD0 1980 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 HEATR9A2RTY3 570 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 PSMD11O00231 422 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 HRO43593 1189 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 TM7SF2O76062 418 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 FSBPO95073 299 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 LPOP22079 712 aaPredicted RBP33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 ETV3P41162 512 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 ZNF284Q2VY69 593 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 HP1BP3Q5SSJ5 553 aaPredicted RBP33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 KIAA0895LQ68EN5 471 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 Q6ZVL8 140 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 TRIM69Q86WT6 500 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 PPHLN1Q8NEY8 458 aaKnown RBP33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 COQ10AQ96MF6 247 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 NFU1Q9UMS0 254 aa33.26■■■□□ 2.92
CSNK1E-204ENST00000403904 MROH6A6NGR9 719 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 C10orf142B7Z368 130 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 FGL2Q14314 439 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 DNAJC21Q5F1R6 531 aaKnown RBP33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 ZBTB44Q8NCP5 570 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 ZNF778Q96MU6 729 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 SLC17A9Q9BYT1 436 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 FAM129AQ9BZQ8 928 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 IL17CQ9P0M4 197 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 MAD1L1Q9Y6D9 718 aa33.26■■■□□ 2.91
CSNK1E-204ENST00000403904 THADAQ6YHU6 1953 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 RECQL5O94762 991 aaPredicted RBP33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 PAK4O96013 591 aaPredicted RBP33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 IGHV4-34P06331 123 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 PDIA2Q13087 525 aaKnown RBP33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 TMEFF1Q8IYR6 380 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 OR4K2Q8NGD2 314 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 OR13C4Q8NGS5 318 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 BIRC7Q96CA5 298 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 C1QTNF2Q9BXJ5 285 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 SAMD15Q9P1V8 674 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 CD84Q9UIB8 345 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 PKP3Q9Y446 797 aa33.25■■■□□ 2.91
CSNK1E-204ENST00000403904 STX7O15400 261 aaKnown RBP33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 SPINT3P49223 89 aa33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 ZNF140P52738 457 aaPredicted RBP33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 PDE1BQ01064 536 aa33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 SGCGQ13326 291 aa33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 NAA30Q147X3 362 aaPredicted RBP33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 CENPUQ71F23 418 aa33.24■■■□□ 2.91
CSNK1E-204ENST00000403904 TECPR1Q7Z6L1 1165 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms