RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ATXN2Q99700 1313 aaKnown RBP17.69■□□□□ 0.42
CTNS-203ENST00000399306 A6NNZ2 444 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 ARHGAP33O14559 1287 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 WNT9AO14904 365 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 RECQL5O94762 991 aaPredicted RBP17.68■□□□□ 0.42
CTNS-203ENST00000399306 SUN1O94901 812 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 PYGLP06737 847 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 HOXC4P09017 264 aaPredicted RBP17.68■□□□□ 0.42
CTNS-203ENST00000399306 CTPS1P17812 591 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 GM2AP17900 193 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 RPL22P35268 128 aaKnown RBP17.68■□□□□ 0.42
CTNS-203ENST00000399306 RABIFP47224 123 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 CDK16Q00536 496 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 PTSQ03393 145 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 MTM1Q13496 603 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 TUBB2AQ13885 445 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 GALNT3Q14435 633 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 SIRPB2Q5JXA9 342 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 LRRC66Q68CR7 880 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 ESRP1Q6NXG1 681 aaKnown RBP17.68■□□□□ 0.42
CTNS-203ENST00000399306 TTC27Q6P3X3 843 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 GCNT7Q6ZNI0 430 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 PRR23CQ6ZRP0 262 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 TECPR1Q7Z6L1 1165 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 OXR1Q8N573 874 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 DTD2Q96FN9 168 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 TUBB2BQ9BVA1 445 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 ERVMER34-1Q9H9K5 563 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 ZFYVE1Q9HBF4 777 aa17.68■□□□□ 0.42
CTNS-203ENST00000399306 CABIN1Q9Y6J0 2220 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 AP3B1O00203 1094 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 TLR4O00206 839 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 PPFIA2O75334 1257 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 GAS8O95995 478 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 CFIP05156 583 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 KCNJ1P48048 391 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 PFN3P60673 137 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 IRX4P78413 519 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 WSCD2Q2TBF2 565 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 TMC3Q7Z5M5 1100 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 TSPAN33Q86UF1 283 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 DTX3LQ8TDB6 740 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 KLK6Q92876 244 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 KLHDC7BQ96G42 594 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 BMFQ96LC9 184 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 TBL1YQ9BQ87 522 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 FICDQ9BVA6 458 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 ETNK1Q9HBU6 452 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 PKD2L2Q9NZM6 624 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 NEU2Q9Y3R4 380 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 SLCO1B1Q9Y6L6 691 aa17.67■□□□□ 0.42
CTNS-203ENST00000399306 C1orf232A0A0U1RR37 186 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 LNP1A1A4G5 178 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 RAD51BO15315 384 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 AGTP01019 485 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 WNT1P04628 370 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 HMGCLP35914 325 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 TRIM23P36406 574 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 CTSKP43235 329 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 MAGEA6P43360 314 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 CSNK1EP49674 416 aaKnown RBP17.66■□□□□ 0.42
CTNS-203ENST00000399306 LIMK1P53667 647 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 C21orf59P57076 290 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 NXPH1P58417 271 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 DCDC1P59894 354 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 ARHGAP8P85298 464 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 PDE1BQ01064 536 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 ACOX1Q15067 660 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 FAM182AQ5T1J6 154 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 ARMC3Q5W041 872 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 ZDHHC20Q5W0Z9 365 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 DENND5AQ6IQ26 1287 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 SYDE1Q6ZW31 735 aaPredicted RBP17.66■□□□□ 0.42
CTNS-203ENST00000399306 KDELC2Q7Z4H8 507 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 HSD11B1LQ7Z5J1 315 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 DCLK2Q8N568 766 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 NUS1Q96E22 293 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 C16orf45Q96MC5 204 aaPredicted RBP17.66■□□□□ 0.42
CTNS-203ENST00000399306 RAB6BQ9NRW1 208 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 SMARCAL1Q9NZC9 954 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.66■□□□□ 0.42
CTNS-203ENST00000399306 ANKRD6Q9Y2G4 727 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 ZNF711Q9Y462 761 aa17.66■□□□□ 0.42
CTNS-203ENST00000399306 PATE3B3GLJ2 98 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 YKT6O15498 198 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 CLDN7O95471 211 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 CER1O95813 267 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 C1SP09871 688 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 ZNF883P0CG24 379 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 TSHRP16473 764 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 ENGP17813 658 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 IGFALSP35858 605 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 SPINT3P49223 89 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 GRIK2Q13002 908 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 MSLNQ13421 630 aaPredicted RBP17.65■□□□□ 0.42
CTNS-203ENST00000399306 IRF4Q15306 451 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 ZNF423Q2M1K9 1284 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 ZNF572Q7Z3I7 529 aaPredicted RBP17.65■□□□□ 0.42
CTNS-203ENST00000399306 PDCD7Q8N8D1 485 aaKnown RBP17.65■□□□□ 0.42
CTNS-203ENST00000399306 GLIS1Q8NBF1 620 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms