RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 H3BQ06 376 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 MBTPS2O43462 519 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 LEFTY1O75610 366 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 POLD2P49005 469 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 ZNF234Q14588 700 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 HNRNPA1L2Q32P51 320 aaKnown RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 TUBB8Q3ZCM7 444 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 CRTC1Q6UUV9 634 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 CLEC14AQ86T13 490 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 PNPLA1Q8N8W4 532 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 GRIN3AQ8TCU5 1115 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 CALML6Q8TD86 181 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 LRIG1Q96JA1 1093 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 SRPK1Q96SB4 655 aaKnown RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.73□□□□□ -0.37
TRIM39-204ENST00000396548 DKK3Q9UBP4 350 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 IL36AQ9UHA7 158 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 CKAP5Q14008 2032 aa12.73□□□□□ -0.37
TRIM39-204ENST00000396548 A0A1W2PQ67 120 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 SP100P23497 879 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 FOXN2P32314 431 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 LSP1P33241 339 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 ABCG1P45844 678 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 TMPRSS15P98073 1019 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 THOC5Q13769 683 aaKnown RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 PTAR1Q7Z6K3 402 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 CBARPQ8N350 705 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 RYBPQ8N488 228 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 OR4L1Q8NH43 312 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 FAM161BQ96MY7 647 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 KCNK9Q9NPC2 374 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 SNX15Q9NRS6 342 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 TM9SF1O15321 606 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 KAT7O95251 611 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 WISP3O95389 354 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 UGT2B4P06133 528 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 HNRNPLP14866 589 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 CRHR1P34998 444 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 GRIA2P42262 883 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 GNGT1P63211 74 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 TIAL1Q01085 375 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 ZKSCAN8Q15776 578 aaPredicted RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 UGP2Q16851 508 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 CNSTQ6PJW8 725 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 TCP10LQ8TDR4 215 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 OSBPL1AQ9BXW6 950 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 C12orf65Q9H3J6 166 aaKnown RBP12.72□□□□□ -0.37
TRIM39-204ENST00000396548 SLC17A7Q9P2U7 560 aa12.72□□□□□ -0.37
TRIM39-204ENST00000396548 K7EQS6 105 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 ZWINTO95229 277 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 PRSS56P0CW18 603 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 LHCGRP22888 699 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 NNMTP40261 264 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 HADHAP40939 763 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 PTSQ03393 145 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 ARSIQ5FYB1 569 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 KLHL32Q96NJ5 620 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 FAM129BQ96TA1 746 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 GAS2L1Q99501 681 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-204ENST00000396548 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-204ENST00000396548 FBXO6Q9NRD1 293 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-204ENST00000396548 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-204ENST00000396548 FKBPLQ9UIM3 349 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 SARDHQ9UL12 918 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 EMCNQ9ULC0 261 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 CLDN7O95471 211 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 TIMP2P16035 220 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 OGNP20774 298 aaKnown RBP12.71□□□□□ -0.37
TRIM39-204ENST00000396548 SOX9P48436 509 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 EPHB1P54762 984 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 TPRG1Q6ZUI0 275 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 TSPAN33Q86UF1 283 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 ZNF366Q8N895 744 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 TMIEQ8NEW7 156 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 CKAP2Q8WWK9 683 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 ZNF317Q96PQ6 595 aaPredicted RBP12.71□□□□□ -0.37
TRIM39-204ENST00000396548 C1QTNF1Q9BXJ1 281 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 CAB39LQ9H9S4 337 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 INTS9Q9NV88 658 aaKnown RBP12.71□□□□□ -0.37
TRIM39-204ENST00000396548 PPM1HQ9ULR3 514 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 PLA2G4CQ9UP65 541 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 PLLPQ9Y342 182 aa12.71□□□□□ -0.37
TRIM39-204ENST00000396548 EDDM13A0A1B0GTR0 161 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 SPINT1O43278 529 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 IL12RB1P42701 662 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 SERPINB8P50452 374 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 GALK1P51570 392 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 STC1P52823 247 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 PRAMEP78395 509 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 RAD51Q06609 339 aa12.71□□□□□ -0.38
TRIM39-204ENST00000396548 LRRC14Q15048 493 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms