RNA–Protein interactions for RNA: ENST00000395995.5

NRP1-208, Transcript of neuropilin 1, human

TSL 1 (best) BASIC

Gene NRP1, Length 5,826 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRP1-208	ENST00000395995	POLR1A	O95602	1720 aa	Predicted RBP	11.59	□□□□□ -0.55
NRP1-208	ENST00000395995	DLC1	Q96QB1	1528 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SPHKAP	Q2M3C7	1700 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	PLK4	O00444	970 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	CASK	O14936	926 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	PSIP1	O75475	530 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	APOD	P05090	189 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	CXCR3	P49682	368 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SCRN3	Q0VDG4	424 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	CPTP	Q5TA50	214 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	CNST	Q6PJW8	725 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	TTC29	Q8NA56	475 aa	Predicted RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	ANKRD52	Q8NB46	1076 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	CCDC54	Q8NEL0	328 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	TSEN15	Q8WW01	171 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	P2RX7	Q99572	595 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	HOPX	Q9BPY8	73 aa	Predicted RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SPATA9	Q9BWV2	254 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	TDRD1	Q9BXT4	1180 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	FAM205A	Q6ZU69	1335 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	MDM4	O15151	490 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SLC25A14	O95258	325 aa	Predicted RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	AP3S2	P59780	193 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	ELF3	P78545	371 aa	Predicted RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	ATP13A5	Q4VNC0	1218 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	LLGL2	Q6P1M3	1020 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	FAM131A	Q6UXB0	335 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	NPNT	Q6UXI9	565 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	RIOX2	Q8IUF8	465 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	ADAMTS15	Q8TE58	950 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SLC35C1	Q96A29	364 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	MYO19	Q96H55	970 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	RNF157	Q96PX1	679 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	COPS8	Q99627	209 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	MUC13	Q9H3R2	512 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SGK2	Q9HBY8	427 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	TRMT13	Q9NUP7	481 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	COLEC10	Q9Y6Z7	277 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	DHRS12	A0PJE2	317 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	OR6C75	A6NL08	312 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995		F8VP50	259 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SNX4	O95219	450 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SMIM10L2A	P0DMW4	78 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SMIM10L2B	P0DMW5	78 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	MC4R	P32245	332 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	DNASE1L1	P49184	302 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	NAGLU	P54802	743 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	STXBP1	P61764	594 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	RPP38	P78345	283 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	MED22	Q15528	200 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	PSMD5	Q16401	504 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	BRMS1L	Q5PSV4	323 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	AAGAB	Q6PD74	315 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	GPC2	Q8N158	579 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	CLK4	Q9HAZ1	481 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	CHST7	Q9NS84	486 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SNX7	Q9UNH6	387 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995		A0A1W2PQ67	120 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SLC22A3	O75751	556 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	PGM3	O95394	542 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	S100A6	P06703	90 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	PRKAR2A	P13861	404 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	EIF2S3	P41091	472 aa	Known RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	HNF4A	P41235	474 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	XKR4	Q5GH76	650 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	ALKBH2	Q6NS38	261 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	FOXR1	Q6PIV2	292 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	ATG14	Q6ZNE5	492 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	UBE2R2	Q712K3	238 aa	Predicted RBP	11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	KCTD4	Q8WVF5	259 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	TRIM2	Q9C040	744 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	RNPEPL1	Q9HAU8	725 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	PCDHB1	Q9Y5F3	818 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SETBP1	Q9Y6X0	1596 aa		11.58	□□□□□ -0.56
NRP1-208	ENST00000395995	SRRM3	A6NNA2	597 aa	Predicted RBP	11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	ANKRD63	C9JTQ0	380 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	SHMT1	P34896	483 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	FNBP1L	Q5T0N5	605 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	SRFBP1	Q8NEF9	429 aa	Known RBP	11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	NDN	Q99608	321 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	SNRNP25	Q9BV90	132 aa	Known RBP	11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	CDH19	Q9H159	772 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	RAB21	Q9UL25	225 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	EFR3B	Q9Y2G0	817 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	POLR3H	Q9Y535	204 aa	Predicted RBP	11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	FAM237B	A0A1B0GVD1	139 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	SLC15A5	A6NIM6	579 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	HDAC3	O15379	428 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	LINC00032	P0C843	101 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	ANPEP	P15144	967 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	SSR2	P43308	183 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	ASMT	P46597	345 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	PPP2R2B	Q00005	443 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	INTS5	Q6P9B9	1019 aa	Known RBP	11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	OR5T3	Q8NGG3	340 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	HTATIP2	Q9BUP3	242 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	ACE2	Q9BYF1	805 aa	Predicted RBP	11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	GSDMC	Q9BYG8	508 aa		11.57	□□□□□ -0.56
NRP1-208	ENST00000395995	CCDC59	Q9P031	241 aa	Known RBP	11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms