RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ERVH48-1M5A8F1 160 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 NTN3O00634 580 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 MATN3O15232 486 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 SOCS5O75159 536 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 C1QL1O75973 258 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 MTA2O94776 668 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 CPP00450 1065 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 MPOP05164 745 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 HLA-DQB2P05538 268 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 CEACAM5P06731 702 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 HOXC4P09017 264 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 H2AFZP0C0S5 128 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ELFN1P0C7U0 828 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ALPPL2P10696 532 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 HSPA9P38646 679 aaKnown RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 SSR1P43307 286 aaKnown RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 POLD2P49005 469 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 PCBP4P57723 403 aaKnown RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 TMPRSS3P57727 454 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 RHDQ02161 417 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 PTSQ03393 145 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ADCY2Q08462 1091 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ZBTB17Q13105 803 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 PTK2BQ14289 1009 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 KRT81Q14533 505 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 MESDQ14696 234 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ACOX1Q15067 660 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 NR0B2Q15466 257 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ISXQ2M1V0 245 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 TBC1D25Q3MII6 688 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 MARC1Q5VT66 337 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 OGFOD3Q6PK18 319 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 NPNTQ6UXI9 565 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 H2AFVQ71UI9 128 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 TMPRSS9Q7Z410 1059 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 B3GNT8Q7Z7M8 397 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ZNF843Q8N446 348 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 KCTD6Q8NC69 237 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 GPR156Q8NFN8 814 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 MAPK15Q8TD08 544 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 PDCD6IPQ8WUM4 868 aaKnown RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 BTN2A2Q8WVV5 523 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 EID2BQ96D98 161 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 DTD2Q96FN9 168 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 SCRN2Q96FV2 425 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ATXN7L3BQ96GX2 97 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 HIC2Q96JB3 615 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 RNF157Q96PX1 679 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 IL12RB2Q99665 862 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ZNF670Q9BS34 389 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 C1QTNF7Q9BXJ2 289 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 TEX101Q9BY14 249 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 FRMD8Q9BZ67 464 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 SLC13A1Q9BZW2 595 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 BRD8Q9H0E9 1235 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 TSPY26PQ9H489 355 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 NHEJ1Q9H9Q4 299 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 USP29Q9HBJ7 922 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ASCL3Q9NQ33 180 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 SIRPGQ9P1W8 387 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 KLQ9UEF7 1012 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 PADI4Q9UM07 663 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 PHTF1Q9UMS5 762 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 PLEKHM1Q9Y4G2 1056 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ENTPD2Q9Y5L3 495 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 ASXL3Q9C0F0 2248 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 KCNK1O00180 336 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 USP12O75317 370 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 RASGRP1O95267 797 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 ANXA6P08133 673 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CCNCP24863 283 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 MAN1A1P33908 653 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 SERPINB6P35237 376 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 DUSP3P51452 185 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 SKOR1P84550 965 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 TLE3Q04726 772 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 PDK2Q15119 407 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 TCEAL1Q15170 157 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 HADHQ16836 314 aaKnown RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 SKOR2Q2VWA4 1001 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CFAP58Q5T655 872 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 DENND2CQ68D51 928 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 SLC9A4Q6AI14 798 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 C17orf82Q86X59 251 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 LRRC49Q8IUZ0 686 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 SPACA3Q8IXA5 215 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 FSTL5Q8N475 847 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 TC2NQ8N9U0 490 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 OR56A4Q8NGH8 313 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CTNNBL1Q8WYA6 563 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 SCAMP4Q969E2 229 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 FATE1Q969F0 183 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CCDC74AQ96AQ1 378 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 WBP1Q96G27 269 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 ZNF578Q96N58 590 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CCDC3Q9BQI4 270 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 CEP41Q9BYV8 373 aa8.85□□□□□ -0.99
ATG4A-205ENST00000394892 ABCG4Q9H172 646 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms