RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 OR51F1A6NGY5 319 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 BBIP1A8MTZ0 92 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 FAM155AB1AL88 458 aaPredicted RBP18.87■□□□□ 0.61
CBX1-202ENST00000393408 TIPRLO75663 272 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 CTSHP09668 335 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 BMP2P12643 396 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 PCSK6P29122 969 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 MAPRE1Q15691 268 aaKnown RBP18.87■□□□□ 0.61
CBX1-202ENST00000393408 CLYBLQ8N0X4 340 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 NUP93Q8N1F7 819 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 PCYOX1LQ8NBM8 494 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 HMCESQ96FZ2 354 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 ZNF512Q96ME7 567 aaPredicted RBP18.87■□□□□ 0.61
CBX1-202ENST00000393408 PNPLA3Q9NST1 481 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 OLAHQ9NV23 265 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 DUS2Q9NX74 493 aaKnown RBP18.87■□□□□ 0.61
CBX1-202ENST00000393408 Q9Y3F1 56 aa18.87■□□□□ 0.61
CBX1-202ENST00000393408 A0A1W2PQH9 124 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 CHRNA1P02708 482 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 ALDH3B2P48448 385 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 NDST2P52849 883 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 SH3BP2P78314 561 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 SIRPB2Q5JXA9 342 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 MARC1Q5VT66 337 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 PPP4R4Q6NUP7 873 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 DRAXINQ8NBI3 349 aaPredicted RBP18.86■□□□□ 0.61
CBX1-202ENST00000393408 CANT1Q8WVQ1 401 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 RSPH1Q8WYR4 309 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 PPWD1Q96BP3 646 aaKnown RBP18.86■□□□□ 0.61
CBX1-202ENST00000393408 SERPINB11Q96P15 392 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 ANKRD60Q9BZ19 345 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
CBX1-202ENST00000393408 RGS18Q9NS28 235 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 MAP10Q9P2G4 905 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 MYRFQ9Y2G1 1151 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 DNAJC15Q9Y5T4 150 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 STAMBPO95630 424 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 HAPLN1P10915 354 aaPredicted RBP18.86■□□□□ 0.61
CBX1-202ENST00000393408 CD1DP15813 335 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 CKMT2P17540 419 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 GRIK1P39086 918 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 GRIA3P42263 894 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 CDH13P55290 713 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 USP46P62068 366 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 PRAMEP78395 509 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 NHSL2Q5HYW2 709 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 ZBTB49Q6ZSB9 765 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 ERMP1Q7Z2K6 904 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 TFAP2DQ7Z6R9 452 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 ZNF683Q8IZ20 524 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 FAM110BQ8TC76 370 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 ZUFSPQ96AP4 578 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 KCTD3Q9Y597 815 aa18.86■□□□□ 0.61
CBX1-202ENST00000393408 A0A0J9YYE9 177 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 PLOD2O00469 737 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 NME4O00746 187 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 NELFEP18615 380 aaKnown RBP18.85■□□□□ 0.61
CBX1-202ENST00000393408 FDXRP22570 491 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 TSPY1Q01534 308 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 PRKCQQ04759 706 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 MAP7D1Q3KQU3 841 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 SPATA2LQ8IUW3 424 aaPredicted RBP18.85■□□□□ 0.61
CBX1-202ENST00000393408 TRIML2Q8N7C3 387 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 OR52K2Q8NGK3 314 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 GRIN3AQ8TCU5 1115 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 LRCH3Q96II8 777 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 PRDM5Q9NQX1 630 aaPredicted RBP18.85■□□□□ 0.61
CBX1-202ENST00000393408 ABCD2Q9UBJ2 740 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 CRYL1Q9Y2S2 319 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 TTC24A2A3L6 582 aaPredicted RBP18.85■□□□□ 0.61
CBX1-202ENST00000393408 SOCS2O14508 198 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 LDB2O43679 373 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 CDK14O94921 469 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 FGF4P08620 206 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 KIF19Q2TAC6 998 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 KRT80Q6KB66 452 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 ZNF549Q6P9A3 640 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 THEM5Q8N1Q8 247 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 FAM81AQ8TBF8 368 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 TADA1Q96BN2 335 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 PABPC5Q96DU9 382 aaKnown RBP18.85■□□□□ 0.61
CBX1-202ENST00000393408 CAAP1Q9H8G2 361 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 AGO3Q9H9G7 860 aaKnown RBP18.85■□□□□ 0.61
CBX1-202ENST00000393408 CCM2LQ9NUG4 571 aaPredicted RBP18.85■□□□□ 0.61
CBX1-202ENST00000393408 CPA4Q9UI42 421 aa18.85■□□□□ 0.61
CBX1-202ENST00000393408 NR5A2O00482 541 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 TRMUO75648 421 aaKnown RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 SLC4A1P02730 911 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 ATXN1LP0C7T5 689 aaKnown RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 RHOQP17081 205 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 TIAL1Q01085 375 aaKnown RBP eCLIP18.84■□□□□ 0.61
CBX1-202ENST00000393408 TEX26Q8N6G2 289 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 PTGR2Q8N8N7 351 aaPredicted RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 EXT2Q93063 718 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 RMND5BQ96G75 393 aaPredicted RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 SLC39A13Q96H72 371 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 ASB2Q96Q27 587 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 TCF12Q99081 682 aa18.84■□□□□ 0.61
CBX1-202ENST00000393408 HOPXQ9BPY8 73 aaPredicted RBP18.84■□□□□ 0.61
CBX1-202ENST00000393408 TIMMDC1Q9NPL8 285 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms