RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GALNT2Q10471 571 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 C1orf146Q5VVC0 180 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 TMPRSS6Q8IU80 811 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 HS6ST3Q8IZP7 471 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 SLC22A17Q8WUG5 538 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 FAR2Q96K12 515 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 GCNAQ96QF7 691 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 IL21Q9HBE4 155 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 TBK1Q9UHD2 729 aa19.06■□□□□ 0.64
CCDC50-202ENST00000392456 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 MYOCOSA0A1B0GUC4 107 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 CARNS1A5YM72 827 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 GRM6O15303 877 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 DNAJA2O60884 412 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 CDH16O75309 829 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 APRTP07741 180 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 FOSL1P15407 271 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 GARSP41250 739 aaKnown RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 GRIA1P42261 906 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 MAGEA4P43358 317 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 CLK3P49761 638 aaKnown RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 EPHB3P54753 998 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 ZXDBP98169 803 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 VEPH1Q14D04 833 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 ZNF567Q8N184 647 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 MRPL43Q8N983 215 aaKnown RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 MTBPQ96DY7 904 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 TRMT2BQ96GJ1 504 aaKnown RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 ZNF419Q96HQ0 510 aaPredicted RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 SLC39A8Q9C0K1 460 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 NOL6Q9H6R4 1146 aaKnown RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 C12orf10Q9HB07 376 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 DFFAO00273 331 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 F11P03951 625 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 ALDH3B2P48448 385 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 COL19A1Q14993 1142 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 RGS21Q2M5E4 152 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 TXNDC8Q6A555 127 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 RFWD2Q8NHY2 731 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 ZSCAN18Q8TBC5 510 aaPredicted RBP19.05■□□□□ 0.64
CCDC50-202ENST00000392456 CLPTM1LQ96KA5 538 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 SMPD4Q9NXE4 827 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 GPSM3Q9Y4H4 160 aa19.05■□□□□ 0.64
CCDC50-202ENST00000392456 SHROOM3Q8TF72 1996 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 A0A0A0MRY4 1105 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 TRDMT1O14717 391 aaKnown RBP19.04■□□□□ 0.64
CCDC50-202ENST00000392456 CASQ2O14958 399 aaPredicted RBP19.04■□□□□ 0.64
CCDC50-202ENST00000392456 FOXD2O60548 495 aaPredicted RBP19.04■□□□□ 0.64
CCDC50-202ENST00000392456 ETFBP38117 255 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 ZNF135P52742 658 aaPredicted RBP19.04■□□□□ 0.64
CCDC50-202ENST00000392456 CHRNEQ04844 493 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 PDIA2Q13087 525 aaKnown RBP19.04■□□□□ 0.64
CCDC50-202ENST00000392456 SHHQ15465 462 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 GAREM2Q75VX8 874 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 PCGF5Q86SE9 256 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 IGDCC3Q8IVU1 814 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 GPR65Q8IYL9 337 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 OVCA2Q8WZ82 227 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 HPS1Q92902 700 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 TAMM41Q96BW9 452 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 SPATA13Q96N96 652 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 MARCH7Q9H992 704 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 APPL1Q9UKG1 709 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 ANAPC1Q9H1A4 1944 aa19.04■□□□□ 0.64
CCDC50-202ENST00000392456 CLOCKO15516 846 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 C8AP07357 584 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 CA3P07451 260 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 ZNF23P17027 643 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 GJA1P17302 382 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 PTPN3P26045 913 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 SLC6A4P31645 630 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 NRG1Q02297 640 aaPredicted RBP19.03■□□□□ 0.64
CCDC50-202ENST00000392456 RING1Q06587 406 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 HIF1AQ16665 826 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 CFAP52Q8N1V2 620 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 SLC25A41Q8N5S1 370 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 KREMEN2Q8NCW0 462 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 PYDC1Q8WXC3 89 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 ATL1Q8WXF7 558 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 PEX13Q92968 403 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 TMIGD2Q96BF3 282 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 HTATIP2Q9BUP3 242 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 SHCBP1LQ9BZQ2 653 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 Q9H521 79 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 MYO9BQ13459 2157 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 SPTBN5Q9NRC6 3674 aaKnown RBP19.03■□□□□ 0.64
CCDC50-202ENST00000392456 ZSCAN5BA6NJL1 495 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 B2RBV5 119 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 FKBP9O95302 570 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 IRF1P10914 325 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 IYDQ6PHW0 289 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 KYAT3Q6YP21 454 aaKnown RBP19.03■□□□□ 0.64
CCDC50-202ENST00000392456 PDZD4Q76G19 769 aaPredicted RBP19.03■□□□□ 0.64
CCDC50-202ENST00000392456 SLC51BQ86UW2 128 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 DENND1CQ8IV53 801 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 RTL3Q8N8U3 475 aaKnown RBP19.03■□□□□ 0.64
CCDC50-202ENST00000392456 HDAC11Q96DB2 347 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 NUF2Q9BZD4 464 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 DCTN4Q9UJW0 460 aa19.03■□□□□ 0.64
CCDC50-202ENST00000392456 OLIG2Q13516 323 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms