RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MAPK9P45984 424 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 STX17P56962 302 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 CTBSQ01459 385 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 MRPL49Q13405 166 aaKnown RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 RAPGEF1Q13905 1077 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 AGERQ15109 404 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 CYTH1Q15438 398 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 NADK2Q4G0N4 442 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 DENND2CQ68D51 928 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 TRNP1Q6NT89 227 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 LIPIQ6XZB0 460 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 NLRP14Q86W24 1093 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 ZSWIM9Q86XI8 627 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 DNAAF5Q86Y56 855 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 CAMK1DQ8IU85 385 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 ESX1Q8N693 406 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 BMPERQ8N8U9 685 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 OR10G6Q8NH81 332 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 HCAR2Q8TDS4 363 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 PDCD6IPQ8WUM4 868 aaKnown RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 TBC1D31Q96DN5 1066 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 DHTKD1Q96HY7 919 aaPredicted RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 GSDMAQ96QA5 445 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 SLC38A3Q99624 504 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 ZPBPQ9BS86 351 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 TWSG1Q9GZX9 223 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 PHPT1Q9NRX4 125 aaPredicted RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 GOLGA6AQ9NYA3 693 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 LHX3Q9UBR4 397 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 CROTQ9UKG9 612 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 SUFUQ9UMX1 484 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 PLEKHM1Q9Y4G2 1056 aa9.65□□□□□ -0.86
IFT88-203ENST00000389373 TMEM184BQ9Y519 407 aaPredicted RBP9.65□□□□□ -0.86
IFT88-203ENST00000389373 NBPF19A0A087WUL8 3843 aa9.65□□□□□ -0.87
IFT88-203ENST00000389373 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 LRP4O75096 1905 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 PIPSLA2A3N6 862 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 DNAJB5O75953 348 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 LRIG2O94898 1065 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 FUCA1P04066 466 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 HOXC4P09017 264 aaPredicted RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 PNMA6AP0CW24 399 aaPredicted RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 ATXN8OSP0DMR3 200 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 CD44P16070 742 aaKnown RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 ADRA1BP35368 520 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 TRIM23P36406 574 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 ADCY8P40145 1251 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 ACTR1BP42025 376 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 POLD2P49005 469 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 ACTR1AP61163 376 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 FOXM1Q08050 763 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 SQSTM1Q13501 440 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 C15orf59Q2T9L4 293 aaPredicted RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 CRTC2Q53ET0 693 aaPredicted RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 INO80DQ53TQ3 878 aaPredicted RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 BRAT1Q6PJG6 821 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 DOK6Q6PKX4 331 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 C6orf15Q6UXA7 325 aaPredicted RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 SLC47A2Q86VL8 602 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 XYLT1Q86Y38 959 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 TRIM59Q8IWR1 403 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 EMC1Q8N766 993 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 TMEM35BQ8NCS4 154 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 PTCD2Q8WV60 388 aaKnown RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 NELFBQ8WX92 580 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 CASKIN2Q8WXE0 1202 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 ULBP3Q9BZM4 244 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 FBXO8Q9NRD0 319 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 TMEM51Q9NW97 253 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 LUZP4Q9P127 313 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 UBA2Q9UBT2 640 aaPredicted RBP9.64□□□□□ -0.87
IFT88-203ENST00000389373 CTNND2Q9UQB3 1225 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 MAP4K5Q9Y4K4 846 aa9.64□□□□□ -0.87
IFT88-203ENST00000389373 ANKRD36A6QL64 1941 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 TSPAN11A1L157 253 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 A6NCN8 305 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 RASA4BC9J798 803 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 RASA4O43374 803 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 DLGAP3O95886 979 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 CEACAM5P06731 702 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 PLEKP08567 350 aaPredicted RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 MYCLP1P12525 358 aaPredicted RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 ZNF28P17035 718 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 ERCC5P28715 1186 aaPredicted RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 CLCN1P35523 988 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 GPLD1P80108 840 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 RALGDSQ12967 914 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 NFATC2Q13469 925 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 PEX6Q13608 980 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 GRM3Q14832 879 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 INPP5JQ15735 1006 aaPredicted RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 PRR30Q53SZ7 412 aaPredicted RBP9.63□□□□□ -0.87
IFT88-203ENST00000389373 MANEALQ5VSG8 457 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 TAF3Q5VWG9 929 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 C1QL3Q5VWW1 255 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 TTI2Q6NXR4 508 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 TRIM65Q6PJ69 517 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 ARHGAP22Q7Z5H3 698 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 TICAM1Q8IUC6 712 aa9.63□□□□□ -0.87
IFT88-203ENST00000389373 GALNT6Q8NCL4 622 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms