RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 TK2O00142 265 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 GALTP07902 379 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 TCN1P20061 433 aaPredicted RBP8.96□□□□□ -0.97
GPNMB-202ENST00000381990 MYF6P23409 242 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 DNAJB2P25686 324 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 PGFP49763 221 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 SMARCB1Q12824 385 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 SLC12A1Q13621 1099 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 SQLEQ14534 574 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 MTX3Q5HYI7 312 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 TMEM198Q66K66 360 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 ELMSAN1Q6PJG2 1045 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 CHSY3Q70JA7 882 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 PIWIL4Q7Z3Z4 852 aaKnown RBP8.96□□□□□ -0.97
GPNMB-202ENST00000381990 KCNMB4Q86W47 210 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 CLVS1Q8IUQ0 354 aaPredicted RBP8.96□□□□□ -0.97
GPNMB-202ENST00000381990 MYO1HQ8N1T3 1032 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 FAM47BQ8NA70 645 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 GOLM1Q8NBJ4 401 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 ATAD1Q8NBU5 361 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 ZNF784Q8NCA9 323 aaPredicted RBP8.96□□□□□ -0.97
GPNMB-202ENST00000381990 ITPKCQ96DU7 683 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 ATXN7L3BQ96GX2 97 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 SCLYQ96I15 445 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 ZNF512Q96ME7 567 aaPredicted RBP8.96□□□□□ -0.97
GPNMB-202ENST00000381990 SERPINB11Q96P15 392 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 PGLYRP2Q96PD5 576 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 C1QTNF1Q9BXJ1 281 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 SEMA6AQ9H2E6 1030 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 CCDC68Q9H2F9 335 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 CACNA2D2Q9NY47 1150 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 SFMBT1Q9UHJ3 866 aa8.96□□□□□ -0.97
GPNMB-202ENST00000381990 FNDC1Q4ZHG4 1894 aaPredicted RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 E2F8A0AVK6 867 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 TBKBP1A7MCY6 615 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 PAGE1O75459 146 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CPB1P15086 417 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 DCKP27707 260 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 GPR15P49685 360 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 ATN1P54259 1190 aaPredicted RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CCL23P55773 120 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 NME5P56597 212 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 NAA20P61599 178 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 GPR17Q13304 367 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 LRP8Q14114 963 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 SDHAF4Q5VUM1 108 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 FAM45BPQ6NSW5 357 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 PID1Q7Z2X4 250 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 KDM1BQ8NB78 822 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 DDHD1Q8NEL9 900 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 ZSCAN18Q8TBC5 510 aaPredicted RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 FAM45AQ8TCE6 357 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 SPPL2BQ8TCT7 592 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 THAP11Q96EK4 314 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CNDP2Q96KP4 475 aaKnown RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 B3GALT6Q96L58 329 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 PHF12Q96QT6 1004 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 TCF12Q99081 682 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 AGAP2Q99490 1192 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CIB1Q99828 191 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CEP41Q9BYV8 373 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 SIK2Q9H0K1 926 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 RHOJQ9H4E5 214 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CAB39LQ9H9S4 337 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 LIN28AQ9H9Z2 209 aaKnown RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CD320Q9NPF0 282 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CASS4Q9NQ75 786 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 PIH1D1Q9NWS0 290 aaKnown RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 DUS2Q9NX74 493 aaKnown RBP8.96□□□□□ -0.98
GPNMB-202ENST00000381990 TMEM9Q9P0T7 183 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 HCSTQ9UBK5 93 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 CD300AQ9UGN4 299 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 ZNF711Q9Y462 761 aa8.96□□□□□ -0.98
GPNMB-202ENST00000381990 FAM92AA1XBS5 289 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 TRIM64BA6NI03 449 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 TARM1B6A8C7 271 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 E7ENX8 843 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 KCNK1O00180 336 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 PSMD12O00232 456 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-202ENST00000381990 FGF10O15520 208 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-202ENST00000381990 MSI1O43347 362 aaKnown RBP8.95□□□□□ -0.98
GPNMB-202ENST00000381990 TBC1D4O60343 1298 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 SUPT3HO75486 399 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 BAIAP3O94812 1187 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 CSPG5O95196 566 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 PTPN3P26045 913 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 HOXC13P31276 330 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 NPY2RP49146 381 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 KPNA2P52292 529 aaKnown RBP8.95□□□□□ -0.98
GPNMB-202ENST00000381990 ATXN3P54252 364 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-202ENST00000381990 PFKPQ01813 784 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 ZNF33AQ06730 810 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 DLG2Q15700 870 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 PSMD5Q16401 504 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 UGP2Q16851 508 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 MANEALQ5VSG8 457 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 TTC33Q6PID6 262 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-202ENST00000381990 CES3Q6UWW8 571 aa8.95□□□□□ -0.98
GPNMB-202ENST00000381990 SLC39A5Q6ZMH5 540 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms