RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 NDST3O95803 873 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 GLP2RO95838 553 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 HOXD9P28356 352 aaPredicted RBP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 PPARGP37231 505 aaPredicted RBP21.59■■□□□ 1.05
TRIM54-202ENST00000380075 UBE3AQ05086 875 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 HERC3Q15034 1050 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 MUM1Q2TAK8 710 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 ZNF789Q5FWF6 425 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 HECTD3Q5T447 861 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 GPR153Q6NV75 609 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 LRRC74BQ6ZQY2 392 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 KDM1BQ8NB78 822 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 AUTS2Q8WXX7 1259 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 MYEOVQ96EZ4 313 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 POPDC3Q9HBV1 291 aa21.59■■□□□ 1.05
TRIM54-202ENST00000380075 RGSL1A5PLK6 1076 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 RPP40O75818 363 aaKnown RBP21.58■■□□□ 1.05
TRIM54-202ENST00000380075 IPO13O94829 963 aaKnown RBP21.58■■□□□ 1.05
TRIM54-202ENST00000380075 CCDC166P0CW27 439 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 OGNP20774 298 aaKnown RBP21.58■■□□□ 1.05
TRIM54-202ENST00000380075 CES1P23141 567 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 IRS1P35568 1242 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 ARSDP51689 593 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 CLNS1AP54105 237 aaKnown RBP21.58■■□□□ 1.05
TRIM54-202ENST00000380075 SH2D4BQ5SQS7 431 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 FRMD7Q6ZUT3 714 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 RP9Q8TA86 221 aaKnown RBP21.58■■□□□ 1.05
TRIM54-202ENST00000380075 ZNF512Q96ME7 567 aaPredicted RBP21.58■■□□□ 1.05
TRIM54-202ENST00000380075 PSKH2Q96QS6 385 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 TCF25Q9BQ70 676 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 NUF2Q9BZD4 464 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 ZNF385DQ9H6B1 395 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 TLR9Q9NR96 1032 aa21.58■■□□□ 1.05
TRIM54-202ENST00000380075 ARIH1Q9Y4X5 557 aaPredicted RBP21.58■■□□□ 1.05
TRIM54-202ENST00000380075 ZNF840PA6NDX5 716 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 ITGAXP20702 1163 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 PIK3R1P27986 724 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 SLC6A4P31645 630 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 CUL3Q13618 768 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 CHST9Q7L1S5 443 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 SPATA6LQ8N4H0 392 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 MAELQ96JY0 434 aaKnown RBP21.57■■□□□ 1.04
TRIM54-202ENST00000380075 TRMOQ9BU70 441 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 ZBP1Q9H171 429 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 WDR55Q9H6Y2 383 aaPredicted RBP21.57■■□□□ 1.04
TRIM54-202ENST00000380075 NMRK1Q9NWW6 199 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 UBA2Q9UBT2 640 aaPredicted RBP21.57■■□□□ 1.04
TRIM54-202ENST00000380075 AFF4Q9UHB7 1163 aaKnown RBP21.57■■□□□ 1.04
TRIM54-202ENST00000380075 CDH22Q9UJ99 828 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 MUSKO15146 869 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 KDELR3O43731 214 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 CCR10P46092 362 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 SESN3P58005 492 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 IL31Q6EBC2 164 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 MICAL1Q8TDZ2 1067 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 TRIB3Q96RU7 358 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 HERC2P3Q9BVR0 1158 aa21.57■■□□□ 1.04
TRIM54-202ENST00000380075 CINPQ9BW66 212 aaPredicted RBP21.57■■□□□ 1.04
TRIM54-202ENST00000380075 PRPF19Q9UMS4 504 aaKnown RBP21.57■■□□□ 1.04
TRIM54-202ENST00000380075 ZFP37Q9Y6Q3 630 aaPredicted RBP21.57■■□□□ 1.04
TRIM54-202ENST00000380075 PLXNA4Q9HCM2 1894 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 ILVBLA1L0T0 632 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 TTC24A2A3L6 582 aaPredicted RBP21.56■■□□□ 1.04
TRIM54-202ENST00000380075 LIN7AO14910 233 aaPredicted RBP21.56■■□□□ 1.04
TRIM54-202ENST00000380075 EPHA3P29320 983 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 OXCT1P55809 520 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 KIAA1841Q6NSI8 718 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 ADGRG6Q86SQ4 1221 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 DEFB123Q8N688 67 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 BLOC1S5Q8TDH9 187 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 TBATAQ96M53 351 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 LENG8Q96PV6 779 aaPredicted RBP21.56■■□□□ 1.04
TRIM54-202ENST00000380075 NDE1Q9NXR1 346 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 STK39Q9UEW8 545 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 LOC100653049A0A140TA62 436 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 A8MT66 165 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 NEMP1O14524 444 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 CD3EAPO15446 510 aaKnown RBP21.56■■□□□ 1.04
TRIM54-202ENST00000380075 KRT34O76011 436 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 CRTAMO95727 393 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 CTSAP10619 480 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 FDXRP22570 491 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 ADGRE1Q14246 886 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 RALGPS1Q5JS13 557 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 PLPP4Q5VZY2 271 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 C16orf89Q6UX73 402 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 SDCCAG8Q86SQ7 713 aaPredicted RBP21.56■■□□□ 1.04
TRIM54-202ENST00000380075 DEFB107AQ8IZN7 70 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 CFAP52Q8N1V2 620 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 DTX3LQ8TDB6 740 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 MYRFLQ96LU7 910 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 TRPM5Q9NZQ8 1165 aa21.56■■□□□ 1.04
TRIM54-202ENST00000380075 MARCH4Q9P2E8 410 aaPredicted RBP21.56■■□□□ 1.04
TRIM54-202ENST00000380075 MYO9BQ13459 2157 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 A0A0D9SEW6 157 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 ADAM12O43184 909 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 CXCL14O95715 111 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 GOT2P00505 430 aaKnown RBP21.55■■□□□ 1.04
TRIM54-202ENST00000380075 ANPEPP15144 967 aa21.55■■□□□ 1.04
TRIM54-202ENST00000380075 OR1D2P34982 312 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms