RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PTK6Q13882 451 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 POU6F1Q14863 301 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DEFB133Q30KQ1 61 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 CWF19L1Q69YN2 538 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 C15orf39Q6ZRI6 1047 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 LINC00523Q86TU6 105 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ZNF677Q86XU0 584 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 TMEM40Q8WWA1 233 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 SMPDL3BQ92485 455 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 OSBPL8Q9BZF1 889 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 FAM83DQ9H4H8 585 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 PDE7BQ9NP56 450 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 VPS45Q9NRW7 570 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DDX18Q9NVP1 670 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DNPEPQ9ULA0 475 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DNAJC25-GNG10A0A024R161 153 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 URADA6NGE7 173 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 POLR1CO15160 346 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 CHADO15335 359 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DUX1O43812 170 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ZBTB14O43829 449 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 CIB2O75838 187 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 TYK2P29597 1187 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ABCG1P45844 678 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 FMO1Q01740 532 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 KIF19Q2TAC6 998 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ACAD10Q6JQN1 1059 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ZCCHC8Q6NZY4 707 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 TRMT10CQ7L0Y3 403 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ADGRD2Q7Z7M1 963 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 C1orf127Q8N9H9 656 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 FAM81AQ8TBF8 368 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 OTULINQ96BN8 352 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 PAAF1Q9BRP4 392 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 KLHL25Q9H0H3 589 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DTNAQ9Y4J8 743 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 BACE2Q9Y5Z0 518 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 E2F8A0AVK6 867 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 WDR27A2RRH5 827 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 AHCYL1O43865 530 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 BMP10O95393 424 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 GLP2RO95838 553 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 MT-ND3P03897 115 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 NCKAP1LP55160 1127 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 MCL1Q07820 350 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 STX4Q12846 297 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 PDIA2Q13087 525 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 USP10Q14694 798 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 CNGA2Q16280 664 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ATXN7L2Q5T6C5 722 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 ZDHHC24Q6UX98 284 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 EFL1Q7Z2Z2 1120 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 DQX1Q8TE96 717 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 CCDC124Q96CT7 223 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 HMCESQ96FZ2 354 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 MYO19Q96H55 970 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 MBOAT7Q96N66 472 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 B3GNT5Q9BYG0 378 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 UPF3AQ9H1J1 476 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 NMUR1Q9HB89 426 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 TM7SF3Q9NS93 570 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 SUCOQ9UBS9 1254 aaKnown RBP6.56□□□□□ -1.36
NEDD9-202ENST00000379446 PADI2Q9Y2J8 665 aa6.56□□□□□ -1.36
NEDD9-202ENST00000379446 GNG14A0A1W2PPG7 69 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ANKDD1BA6NHY2 528 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 OR2AG2A6NM03 316 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 XPO1O14980 1071 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 HNRNPRO43390 633 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 RNGTTO60942 597 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 AGFG2O95081 481 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 LINGO3P0C6S8 592 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ZSCAN5DPP0CG00 497 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PIM1P11309 404 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ITIH2P19823 946 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CD86P42081 329 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GRK6P43250 576 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 DYNC1I2Q13409 638 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GRAMD1BQ3KR37 738 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 KCTD21Q4G0X4 260 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 EXOC3L1Q86VI1 746 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 DAW1Q8N136 415 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 EIF1ADQ8N9N8 165 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 DTNBP1Q96EV8 351 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PGM2Q96G03 612 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 COPS8Q99627 209 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 FZD8Q9H461 694 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 DPEP3Q9H4B8 488 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 C10orf88Q9H8K7 445 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 XPNPEP1Q9NQW7 623 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 NMRK1Q9NWW6 199 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GALNT8Q9NY28 637 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 IL36AQ9UHA7 158 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ATXN7O15265 892 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 FGF10O15520 208 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ATP6V1B1P15313 513 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CD38P28907 300 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CTHP32929 405 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 MNX1P50219 401 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GNA12Q03113 381 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms