RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ALFQ53S48 1182 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CLLU1OSQ5K130 101 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 WASHC2DQ5SRD0 308 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 GET4Q7L5D6 327 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-202ENST00000377797 RD3Q7Z3Z2 195 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CLEC4FQ8N1N0 589 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 FEM1CQ96JP0 617 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 GPR21Q99679 349 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 KIF17Q9P2E2 1029 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 INSL5Q9Y5Q6 135 aa14.53□□□□□ -0.08
TCOF1-202ENST00000377797 CYP11A1P05108 521 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 MPSTP25325 297 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 SOAT1P35610 550 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 GPR1P46091 355 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 FRG1Q14331 258 aaKnown RBP14.52□□□□□ -0.08
TCOF1-202ENST00000377797 PGS1Q32NB8 556 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 RAET1GQ6H3X3 334 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 CAND1Q86VP6 1230 aaKnown RBP14.52□□□□□ -0.08
TCOF1-202ENST00000377797 NMUR2Q9GZQ4 415 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 PIF1Q9H611 641 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 WDR55Q9H6Y2 383 aaPredicted RBP14.52□□□□□ -0.08
TCOF1-202ENST00000377797 RAD18Q9NS91 495 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 GLYATL1P3A0A0U1RQE8 302 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 F8W810 466 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 FAM189A1O60320 539 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 SNAP91O60641 907 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 SERPINA6P08185 405 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 CSKP41240 450 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 SLC1A2P43004 574 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 POLE2P56282 527 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 ELF3P78545 371 aaPredicted RBP14.52□□□□□ -0.08
TCOF1-202ENST00000377797 LYPLAL1Q5VWZ2 237 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 RIPOR1Q6ZS17 1223 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 FAM126BQ8IXS8 530 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 ARFGAP1Q8N6T3 406 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 ANKRD31Q8N7Z5 1873 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 CXorf40AQ8TE69 158 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 C7orf26Q96N11 449 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 CDH19Q9H159 772 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 ABCB8Q9NUT2 735 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 FKBPLQ9UIM3 349 aa14.52□□□□□ -0.08
TCOF1-202ENST00000377797 CITO14578 2027 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 FAM159BA6NKW6 160 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 M0QZQ0 153 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 FKBP6O75344 327 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 MLYCDO95822 493 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 ELFN1P0C7U0 828 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 IRF8Q02556 426 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 TMC5Q6UXY8 1006 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 CERS6Q6ZMG9 384 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 CLNKQ7Z7G1 428 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 FITM2Q8N6M3 262 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 GATA5Q9BWX5 397 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 TDRKHQ9Y2W6 561 aaKnown RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 SMCHD1A6NHR9 2005 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 SH3BGRLO75368 114 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 IPO13O94829 963 aaKnown RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 SEC24DO94855 1032 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 SLC25A14O95258 325 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 F7P08709 466 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 EPB42P16452 691 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 PSMA4P25789 261 aaKnown RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 EEF1DP29692 281 aaKnown RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 RFC2P35250 354 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 POLD2P49005 469 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 ARL13AQ5H913 290 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 RNF168Q8IYW5 571 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 FSTL5Q8N475 847 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 JADE3Q92613 823 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 ZNF599Q96NL3 588 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 STN1Q9H668 368 aaKnown RBP14.52□□□□□ -0.09
TCOF1-202ENST00000377797 RMND5AQ9H871 391 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 ZNF358Q9NW07 568 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 BTRCQ9Y297 605 aa14.52□□□□□ -0.09
TCOF1-202ENST00000377797 VPS4BO75351 444 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 PRAMEF1O95521 474 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 CST5P28325 142 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-202ENST00000377797 ZNF33AQ06730 810 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 RFTN1Q14699 578 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-202ENST00000377797 RELL1Q8IUW5 271 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 OR13C4Q8NGS5 318 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 ACDQ96AP0 544 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 CLCA2Q9UQC9 943 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 SNX13Q9Y5W8 968 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 OR51F1A6NGY5 319 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 PKNOX1P55347 436 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 PRKD1Q15139 912 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-202ENST00000377797 DNAJC14Q6Y2X3 702 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-202ENST00000377797 CLYBLQ8N0X4 340 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 PCDH20Q8N6Y1 951 aaKnown RBP14.51□□□□□ -0.09
TCOF1-202ENST00000377797 LINC01465Q8N7H1 131 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 TRMOQ9BU70 441 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 ARL5AQ9Y689 179 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 PRR5-ARHGAP8B1AHC4 643 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 FFAR3O14843 346 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 DCLK1O15075 740 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 GPR42O15529 346 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 ME2P23368 584 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 ARHGAP8P85298 464 aa14.51□□□□□ -0.09
TCOF1-202ENST00000377797 SLC39A5Q6ZMH5 540 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms