RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 LSM14AQ8ND56 463 aaKnown RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 GPR156Q8NFN8 814 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 LIN37Q96GY3 246 aaPredicted RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 XPO4Q9C0E2 1151 aaKnown RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 TMEM168Q9H0V1 697 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 CPNE5Q9HCH3 593 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 EPB41L5Q9HCM4 733 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 KCTD5Q9NXV2 234 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 PHTF1Q9UMS5 762 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 PTPRQQ9UMZ3 2332 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 B4DGG1 531 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 TMX2-CTNND1H3BSU7 103 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 HEXIM1O94992 359 aaKnown RBP21.06■□□□□ 0.96
VSX1-201ENST00000376707 PRB1P04280 392 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 TPM3P06753 285 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 MYCLP1P12525 358 aaPredicted RBP21.06■□□□□ 0.96
VSX1-201ENST00000376707 CASP14P31944 242 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 SLC25A11Q02978 314 aaKnown RBP21.06■□□□□ 0.96
VSX1-201ENST00000376707 TRAF2Q12933 501 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 RALGPS1Q5JS13 557 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 B3GNT8Q7Z7M8 397 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 PELI3Q8N2H9 469 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 Q8N9G6 341 aaPredicted RBP21.06■□□□□ 0.96
VSX1-201ENST00000376707 STRADBQ9C0K7 418 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 LRRN3Q9H3W5 708 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 DPEP2Q9H4A9 486 aa21.06■□□□□ 0.96
VSX1-201ENST00000376707 PHPT1Q9NRX4 125 aaPredicted RBP21.06■□□□□ 0.96
VSX1-201ENST00000376707 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.06■□□□□ 0.96
VSX1-201ENST00000376707 A0A1W2PQM1 296 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 PRSS38A1L453 326 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 CDRT15L2A8MXV6 281 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 MYO1FO00160 1098 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 PLD2O14939 933 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 ITGA2BP08514 1039 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 GLB1P16278 677 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 INHBCP55103 352 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 C19orf57Q0VDD7 668 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 EIF3IQ13347 325 aaKnown RBP21.05■□□□□ 0.96
VSX1-201ENST00000376707 ARHGEF7Q14155 803 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 HADHQ16836 314 aaKnown RBP21.05■□□□□ 0.96
VSX1-201ENST00000376707 C14orf28Q4W4Y0 310 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 CCDC122Q5T0U0 273 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 ARMC12Q5T9G4 340 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 ARHGAP40Q5TG30 622 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 OGFOD3Q6PK18 319 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 USP45Q70EL2 814 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 CLEC14AQ86T13 490 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 CCNJLQ8IV13 435 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 TMEM74Q96NL1 305 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 FOXP3Q9BZS1 431 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 SUDS3Q9H7L9 328 aaPredicted RBP21.05■□□□□ 0.96
VSX1-201ENST00000376707 CARS2Q9HA77 564 aaKnown RBP21.05■□□□□ 0.96
VSX1-201ENST00000376707 RCOR3Q9P2K3 495 aaPredicted RBP21.05■□□□□ 0.96
VSX1-201ENST00000376707 APPL1Q9UKG1 709 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 LRP4O75096 1905 aa21.05■□□□□ 0.96
VSX1-201ENST00000376707 RP1P56715 2156 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 ANKRD36A6QL64 1941 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 GOLGA6CA6NDK9 693 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 GOLGA6BA6NDN3 693 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 NOBOXO60393 691 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 PGLSO95336 258 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 GOLGA6DP0CG33 693 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 ETV3P41162 512 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 SKOR1P84550 965 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 CERCAMQ5T4B2 595 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 SPECC1LQ69YQ0 1117 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 RAB11FIP2Q7L804 512 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 HEATR4Q86WZ0 1026 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 LRRC49Q8IUZ0 686 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 FBXO39Q8N4B4 442 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 CCL4L1Q8NHW4 92 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 FAM71BQ8TC56 605 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 KIAA1524Q8TCG1 905 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 DTD2Q96FN9 168 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 SCRN2Q96FV2 425 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 NT5MQ9NPB1 228 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 GOLGA6AQ9NYA3 693 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 LRIT1Q9P2V4 623 aa21.04■□□□□ 0.96
VSX1-201ENST00000376707 NPIPB15A6NHN6 443 aaPredicted RBP21.03■□□□□ 0.96
VSX1-201ENST00000376707 PSMD11O00231 422 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 KRT10P13645 584 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 PNLIPP16233 465 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 LHCGRP22888 699 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 RHDQ02161 417 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 ITKQ08881 620 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 VAC14Q08AM6 782 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 MMRN1Q13201 1228 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 RAET1GQ6H3X3 334 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 HSD11B1LQ7Z5J1 315 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 SFTPA2Q8IWL1 248 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 TEX101Q9BY14 249 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.03■□□□□ 0.96
VSX1-201ENST00000376707 RNF215Q9Y6U7 377 aa21.03■□□□□ 0.96
VSX1-201ENST00000376707 ERVH48-1M5A8F1 160 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 CD48P09326 243 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 CCNB1P14635 433 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 CTPS1P17812 591 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 IL4RP24394 825 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 CCKBRP32239 447 aa21.02■□□□□ 0.96
VSX1-201ENST00000376707 UGT1A5P35504 534 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms