RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ISG20Q96AZ6 181 aaKnown RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 WDR83Q9BRX9 315 aaKnown RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 MLPHQ9BV36 600 aaPredicted RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 KIFC1Q9BW19 673 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 POLR1EQ9GZS1 481 aaKnown RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 SP110Q9HB58 689 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 SAYSD1Q9NPB0 183 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.99
SNX27-201ENST00000368838 BFARQ9NZS9 450 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 VPS18Q9P253 973 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 SEPT3Q9UH03 358 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 RSPH14Q9UHP6 348 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 FBXO10Q9UK96 956 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 PILRBQ9UKJ0 227 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 MUC22E2RYF6 1773 aaPredicted RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 GOLGA4Q13439 2230 aaKnown RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 ZFHX4Q86UP3 3567 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 FAM208BQ5VWN6 2430 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 GOLGA6L7A0A1B0GV03 622 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 H3BQF6 201 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 DFFAO00273 331 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 USP1O94782 785 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 MAP3K6O95382 1288 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 RHOCP08134 193 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 NFKB1P19838 968 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 CNTFP26441 200 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 MAOBP27338 520 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 OAS2P29728 719 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 NTSR1P30989 418 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 ELK3P41970 407 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 DGKGP49619 791 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 RPS24P62847 133 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 IFFO1Q0D2I5 559 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 SLC10A7Q0GE19 358 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 MSLNQ13421 630 aaPredicted RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 LBRQ14739 615 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 RETSATQ6NUM9 610 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 KDELC1Q6UW63 502 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 CAPN12Q6ZSI9 719 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 C3orf62Q6ZUJ4 267 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 NLRP9Q7RTR0 991 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 SLC41A1Q8IVJ1 513 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 PALM2Q8IXS6 379 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 LMNTD2Q8IXW0 634 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 AGGF1Q8N302 714 aaeCLIP8.85□□□□□ -0.99
SNX27-201ENST00000368838 KDM1BQ8NB78 822 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 C1orf216Q8TAB5 229 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 GSDMBQ8TAX9 411 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 MYEOVQ96EZ4 313 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 OXNAD1Q96HP4 312 aaPredicted RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 ZNF419Q96HQ0 510 aaPredicted RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 CELF6Q96J87 481 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 FEM1CQ96JP0 617 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 C9orf72Q96LT7 481 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 HSPA12BQ96MM6 686 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 HS3ST6Q96QI5 342 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 XPO6Q96QU8 1125 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 SRPK1Q96SB4 655 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 FEM1AQ9BSK4 669 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 C2orf49Q9BVC5 232 aaPredicted RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 NUSAP1Q9BXS6 441 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 PLAC1Q9HBJ0 212 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 DOLKQ9UPQ8 538 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 FAM169AQ9Y6X4 670 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 TDRD6O60522 2096 aaKnown RBP8.85□□□□□ -0.99
SNX27-201ENST00000368838 SPEGQ15772 3267 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 ZFYVE26Q68DK2 2539 aa8.85□□□□□ -0.99
SNX27-201ENST00000368838 IGHV1OR15-9A0A0B4J2B8 117 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 A0A1W2PQ67 120 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 TCRBV9S1A1TA0A576 114 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 ANKRD33BA6NCL7 494 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 FAM159BA6NKW6 160 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 HYAL3O43820 417 aaPredicted RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 SIN3BO75182 1162 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 CD160O95971 181 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 CYBBP04839 570 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 HLA-DQB2P05538 268 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 POLBP06746 335 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 CISD3P0C7P0 127 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 HLA-DPA1P20036 260 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 ATXN3P54252 364 aaPredicted RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 RPL26P61254 145 aaKnown RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 SHC2P98077 582 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SULT2A1Q06520 285 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 GABPB1Q06547 395 aaPredicted RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 GEN1Q17RS7 908 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 KRT71Q3SY84 523 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 HSF5Q4G112 596 aaPredicted RBP8.84□□□□□ -0.99
SNX27-201ENST00000368838 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 TTMPQ5BVD1 217 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 PCID2Q5JVF3 399 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SPANXN3Q5MJ09 141 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 DENND5AQ6IQ26 1287 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 SDE2Q6IQ49 451 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 RFWD3Q6PCD5 774 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 UNQ6494/PRO21346Q6UXR6 183 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 KDM7AQ6ZMT4 941 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 ARHGAP36Q6ZRI8 547 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 TAOK1Q7L7X3 1001 aa8.84□□□□□ -0.99
SNX27-201ENST00000368838 TRMT11Q7Z4G4 463 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms