RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 IFNA4P05014 189 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GABRB2P47870 512 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM132CQ8N3T6 1108 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ANKRD52Q8NB46 1076 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 IFT27Q9BW83 186 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SLC29A3Q9BZD2 475 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ADAM19Q9H013 955 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 AGAP1Q9UPQ3 857 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 LOC100653049A0A140TA62 436 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CLCA1A8K7I4 914 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KIAA0513O60268 411 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ITGA2BP08514 1039 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 WASP42768 502 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DCAF4L1Q3SXM0 396 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MEI1Q5TIA1 1274 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TDRD10Q5VZ19 366 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 IZUMO2Q6UXV1 221 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 UBQLNLQ8IYU4 475 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NSMCE2Q96MF7 247 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 POMT1Q9Y6A1 747 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SGCEO43556 437 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NR1D2Q14995 579 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TMPRSS11AQ6ZMR5 421 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 C4orf50Q6ZRC1 276 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 UNC93AQ86WB7 457 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TMED9Q9BVK6 235 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 EBF3Q9H4W6 596 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ASB7Q9H672 318 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 COPS3Q9UNS2 423 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PAPSS2O95340 614 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 COL19A1Q14993 1142 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TPRG1LQ5T0D9 272 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FAM122CQ6P4D5 195 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NFKBIZQ9BYH8 718 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 LBX1P52954 281 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ANKS3Q6ZW76 656 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GSTCDQ8NEC7 633 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CHPT1Q8WUD6 406 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CDH10Q9Y6N8 788 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 M0QZ92 97 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SLC19A2O60779 497 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RNASEH1O60930 286 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 XRCC1P18887 633 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SRPXP78539 464 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 DLK1P80370 383 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 C9orf131Q5VYM1 1079 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 IL17RCQ8NAC3 791 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TGFBRAP1Q8WUH2 860 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KLHL32Q96NJ5 620 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MED18Q9BUE0 208 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MCCC2Q9HCC0 563 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SH3BP1Q9Y3L3 701 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SMIM22K7EJ46 135 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PPM1BO75688 479 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 FGRP09769 529 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PAICSP22234 425 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CD6P30203 668 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 IDUAP35475 653 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RHOUQ7L0Q8 258 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TAS2R42Q7RTR8 314 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TLCD1Q96CP7 247 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 VPS35Q96QK1 796 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 IL1RL2Q9HB29 575 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF107Q9UII5 783 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 MGAT4BQ9UQ53 548 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM2Q9UHN6 1383 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TTLL13PA6NNM8 815 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SERPINB7O75635 380 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PRKCAP17252 672 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 TBPP20226 339 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HCAR3P49019 387 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HTRA4P83105 476 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PKN1Q16512 942 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PTCHD3Q3KNS1 767 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ATP13A4Q4VNC1 1196 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KCTD6Q8NC69 237 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RAD51AP1Q96B01 352 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RHBDL2Q9NX52 303 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 NR5A2O00482 541 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CLTBP09497 229 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RPA1P27694 616 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 EIF2B2P49770 351 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 RAB5CP51148 216 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GRM2Q14416 872 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SGO1Q5FBB7 561 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CPXCR1Q8N123 301 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 UTP15Q8TED0 518 aaKnown RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 EAF2Q96CJ1 260 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 ANKRD60Q9BZ19 345 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 PCBD2Q9H0N5 130 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 KCTD10Q9H3F6 313 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 POPDC3Q9HBV1 291 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GINS2Q9Y248 185 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HSPB2A8KAH6 182 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 GYPCP04921 128 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CAMK2DQ13557 499 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 HSPB2Q16082 182 aa3.76□□□□□ -1.81
SYNE1-207ENST00000367255 CCDC60Q8IWA6 550 aaPredicted RBP3.76□□□□□ -1.81
SYNE1-207ENST00000367255 SNX27Q96L92 541 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms