RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ARRDC2Q8TBH0 407 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PDCD6IPQ8WUM4 868 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NSMCE1Q8WV22 266 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CTNNBL1Q8WYA6 563 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RAPGEF5Q92565 580 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NAT6Q93015 286 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 DTD2Q96FN9 168 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CRELD1Q96HD1 420 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PRR11Q96HE9 360 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SEMA3CQ99985 751 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CCDC3Q9BQI4 270 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 POLR1BQ9H9Y6 1135 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NT5MQ9NPB1 228 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ASCL3Q9NQ33 180 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MRPL40Q9NQ50 206 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 AMACRQ9UHK6 382 aa13.68□□□□□ -0.22
TNFRSF1A-202ENST00000366159 C3orf70A6NLC5 250 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ZNF487B1APH4 448 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MFAP3LO75121 409 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PRLP01236 227 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MPOP05164 745 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CEACAM5P06731 702 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CES1P23141 567 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KELP23276 732 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KDELR1P24390 212 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ACTN2P35609 894 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ETV3P41162 512 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SSR1P43307 286 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PTSQ03393 145 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GBE1Q04446 702 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 DPTQ07507 201 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 IFI16Q16666 785 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TIGD7Q6NT04 549 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CRTC1Q6UUV9 634 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TSPAN33Q86UF1 283 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 VSIG1Q86XK7 387 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MAP7D3Q8IWC1 876 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 WDR48Q8TAF3 677 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SLC35G2Q8TBE7 412 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SCG3Q8WXD2 468 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NUS1Q96E22 293 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ZNF578Q96N58 590 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RNF157Q96PX1 679 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SMIM14Q96QK8 99 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 POLR1EQ9GZS1 481 aaKnown RBP13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TMEM168Q9H0V1 697 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 WDR26Q9H7D7 661 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 DTLQ9NZJ0 730 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GPR34Q9UPC5 381 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RAI2Q9Y5P3 530 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MGAQ8IWI9 3026 aa13.67□□□□□ -0.22
TNFRSF1A-202ENST00000366159 A0A0J9YYE9 177 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 A0A0U1RQS6 177 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PRSS38A1L453 326 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NOBOXO60393 691 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MAP3K6O95382 1288 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SOD1P00441 154 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TRBC1P01850 177 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CYP2A6P11509 494 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 MYCLP1P12525 358 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ABCG1P45844 678 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ERVPABLB-1P60509 514 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GABREP78334 506 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NIPAL4Q0D2K0 466 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TCEAL1Q15170 157 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SOWAHCQ53LP3 525 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RBM44Q6ZP01 1051 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RFLNAQ6ZTI6 216 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 Q6ZVL8 140 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NLRP8Q86W28 1048 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 C17orf82Q86X59 251 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NRROSQ86YC3 692 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 SFTPA2Q8IWL1 248 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 LSMEM2Q8N112 164 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PLD5Q8N7P1 536 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 CCL4L1Q8NHW4 92 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 GPBAR1Q8TDU6 330 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 LRRN4Q8WUT4 740 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PTCD2Q8WV60 388 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HDAC11Q96DB2 347 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ATXN7L3BQ96GX2 97 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 TDRD1Q9BXT4 1180 aaKnown RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PRORYQ9H606 182 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 NHEJ1Q9H9Q4 299 aaPredicted RBP13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 RBM22Q9NW64 420 aaKnown RBP eCLIP13.66□□□□□ -0.227e-7■■■□□ 16.4
TNFRSF1A-202ENST00000366159 GULP1Q9UBP9 304 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 APPL1Q9UKG1 709 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 DOLKQ9UPQ8 538 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PCDHGA8Q9Y5G5 932 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 ST14Q9Y5Y6 855 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 KALRNO60229 2985 aa13.66□□□□□ -0.22
TNFRSF1A-202ENST00000366159 A0A1W2PQM1 296 aa13.65□□□□□ -0.22
TNFRSF1A-202ENST00000366159 PDE2AO00408 941 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF1A-202ENST00000366159 AKR1B10O60218 316 aa13.65□□□□□ -0.22
TNFRSF1A-202ENST00000366159 HLA-DQB2P05538 268 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms