RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 U3KQV3 271 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 PRKAR1AP10644 381 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 TCF4P15884 667 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 NCK1P16333 377 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 MRPS5P82675 430 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 LCLAT1Q6UWP7 414 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 STK40Q8N2I9 435 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 HASPINQ8TF76 798 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 AZIN2Q96A70 460 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 ELOVL4Q9GZR5 314 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 MIEF1Q9NQG6 463 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 SUCOQ9UBS9 1254 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 ERGIC3Q9Y282 383 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 FAM159BA6NKW6 160 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 MT-ND1P03886 318 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 PABPC1P11940 636 aaKnown RBP13.96□□□□□ -0.17
SMC5-201ENST00000361138 ARPC4P59998 168 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 ATP6V0D1P61421 351 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 ZNF544Q6NX49 715 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 TATDN1Q6P1N9 297 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 EPGNQ6UW88 154 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 PIGZQ86VD9 579 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 GLIS1Q8NBF1 620 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 TOP1MTQ969P6 601 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.17
SMC5-201ENST00000361138 LRIG2O94898 1065 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 ANGPTL1O95841 491 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 AMHP03971 560 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 GPC1P35052 558 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 MED22Q15528 200 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 PITRM1Q5JRX3 1037 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 MED8Q96G25 268 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 ENDOD1O94919 500 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 OR6B1O95007 311 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 FGFR1P11362 822 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 DGKAP23743 735 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 KPNA1P52294 538 aaPredicted RBP13.96□□□□□ -0.17
SMC5-201ENST00000361138 OLR1P78380 273 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 PAN2Q504Q3 1202 aaKnown RBP13.96□□□□□ -0.17
SMC5-201ENST00000361138 FAM131AQ6UXB0 335 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 BTN2A2Q8WVV5 523 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 C12orf43Q96C57 262 aaKnown RBP13.96□□□□□ -0.17
SMC5-201ENST00000361138 CITED4Q96RK1 184 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 LIN28AQ9H9Z2 209 aaKnown RBP13.96□□□□□ -0.17
SMC5-201ENST00000361138 ABCC13Q9NSE7 274 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 TLL2Q9Y6L7 1015 aa13.96□□□□□ -0.17
SMC5-201ENST00000361138 FARP2O94887 1054 aaPredicted RBP13.96□□□□□ -0.18
SMC5-201ENST00000361138 CRATP43155 626 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 MPP1Q00013 466 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 SNAPC2Q13487 334 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 RBM48Q5RL73 367 aaKnown RBP13.96□□□□□ -0.18
SMC5-201ENST00000361138 TFAP2BQ92481 460 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 AP3S1Q92572 193 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 MYLPFQ96A32 169 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 KLHL1Q9NR64 748 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 IFT80Q9P2H3 777 aaPredicted RBP13.96□□□□□ -0.18
SMC5-201ENST00000361138 TOR1BO14657 336 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 FFAR3O14843 346 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 TFECO14948 347 aaPredicted RBP13.96□□□□□ -0.18
SMC5-201ENST00000361138 GPR42O15529 346 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 OTCP00480 354 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 GRK3P35626 688 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 GNA12Q03113 381 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 ZNF829Q3KNS6 432 aaPredicted RBP13.96□□□□□ -0.18
SMC5-201ENST00000361138 NEK5Q6P3R8 708 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 KIAA0408Q6ZU52 694 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 DDX53Q86TM3 631 aaKnown RBP13.96□□□□□ -0.18
SMC5-201ENST00000361138 HDAC10Q969S8 669 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 VPS35Q96QK1 796 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 OR52E6Q96RD3 313 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 AGAP2Q99490 1192 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 B3GNT5Q9BYG0 378 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 SLC17A6Q9P2U8 582 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 SNX6Q9UNH7 406 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 SAMD4AQ9UPU9 718 aaKnown RBP13.96□□□□□ -0.18
SMC5-201ENST00000361138 CORO2BQ9UQ03 480 aa13.96□□□□□ -0.18
SMC5-201ENST00000361138 PABPC4LP0CB38 370 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 ABL2P42684 1182 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 ACAP2Q15057 778 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 INTS11Q5TA45 600 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 MBLAC2Q68D91 279 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 OXSMQ9NWU1 459 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 ARHGAP28Q9P2N2 729 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 SSR3Q9UNL2 185 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 B4GALT5O43286 388 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 BUD23O43709 281 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 DNAJA2O60884 412 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 AXLP30530 894 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 FEN1P39748 380 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 ATAD3BQ5T9A4 648 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 ZNF567Q8N184 647 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 C18orf25Q96B23 403 aaPredicted RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 OR52B2Q96RD2 323 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 YTHDF1Q9BYJ9 559 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 ADAMTS6Q9UKP5 1117 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 IGKV6D-41A0A0C4DH26 115 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms