RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 ARHGAP10A1A4S6 786 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 MAFKO60675 156 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 FGF18O76093 207 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 MT-CYBP00156 380 aaPredicted RBP12.45□□□□□ -0.42
UBA3-202ENST00000361055 ASLP04424 464 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 SLC1A2P43004 574 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 NR1H2P55055 460 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 CDKL1Q00532 357 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 PFKPQ01813 784 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 EIF4EBP2Q13542 120 aaPredicted RBP12.45□□□□□ -0.42
UBA3-202ENST00000361055 APOFQ13790 326 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 C6orf52Q5T4I8 152 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 AGAP9Q5VTM2 703 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 NEPROQ6NW34 567 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 LRRTM3Q86VH5 581 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 GALNT4Q8N4A0 578 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 IPMKQ8NFU5 416 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 MYLPFQ96A32 169 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 MPP4Q96JB8 637 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 FICDQ9BVA6 458 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 TRIM62Q9BVG3 475 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 RBM38Q9H0Z9 239 aaKnown RBP12.45□□□□□ -0.42
UBA3-202ENST00000361055 POMKQ9H5K3 350 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 ARHGEF38Q9NXL2 777 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 PCDHGB4Q9UN71 923 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 PCDHGB5Q9Y5G0 923 aa12.45□□□□□ -0.42
UBA3-202ENST00000361055 LINC01553A4QN01 128 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 KCNU1A8MYU2 1149 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 TMEM233B4DJY2 109 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 PSMD12O00232 456 aaPredicted RBP12.44□□□□□ -0.42
UBA3-202ENST00000361055 DFFAO00273 331 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 TRIM24O15164 1050 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 UBDO15205 165 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 TBC1D4O60343 1298 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 RBP1P09455 135 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 BMPR1AP36894 532 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 SULT2A1Q06520 285 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 ZNF460Q14592 562 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 PABPC1LQ4VXU2 614 aaKnown RBP12.44□□□□□ -0.42
UBA3-202ENST00000361055 IRAK1BP1Q5VVH5 260 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 IL23RQ5VWK5 629 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 RWDD4Q6NW29 188 aaKnown RBP12.44□□□□□ -0.42
UBA3-202ENST00000361055 IYDQ6PHW0 289 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 KLHDC10Q6PID8 442 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 HACD2Q6Y1H2 254 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 TAC4Q86UU9 113 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 LRRC49Q8IUZ0 686 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 SPATA6LQ8N4H0 392 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 ATPAF2Q8N5M1 289 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 METTL25Q8N6Q8 603 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 ZFP28Q8NHY6 868 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 GABPB2Q8TAK5 448 aaPredicted RBP12.44□□□□□ -0.42
UBA3-202ENST00000361055 ZNF597Q96LX8 424 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 SUDS3Q9H7L9 328 aaPredicted RBP12.44□□□□□ -0.42
UBA3-202ENST00000361055 TMLHEQ9NVH6 421 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 THEGQ9P2T0 379 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 CD300AQ9UGN4 299 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 TMCO1Q9UM00 188 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 DMTF1Q9Y222 760 aa12.44□□□□□ -0.42
UBA3-202ENST00000361055 GRXCR1A8MXD5 290 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 E7ENX8 843 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 FGF10O15520 208 aaPredicted RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 GPC4O75487 556 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 IPO13O94829 963 aaKnown RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 IGLV3-25P01717 112 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 SNRPB2P08579 225 aaKnown RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 HOXC13P31276 330 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 INHBCP55103 352 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 TXNL4AP83876 142 aaKnown RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 PDAP1Q13442 181 aaKnown RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 SLC14A2Q15849 920 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 NFE2Q16621 373 aaPredicted RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 MYLK3Q32MK0 819 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 SLC39A12Q504Y0 691 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 TECRLQ5HYJ1 363 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 BRMS1LQ5PSV4 323 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 BTBD8Q5XKL5 378 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 FAM109BQ6ICB4 259 aaPredicted RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 ARHGAP36Q6ZRI8 547 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 GK5Q6ZS86 529 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 SPATA2LQ8IUW3 424 aaPredicted RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 SLC22A9Q8IVM8 553 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 GPR65Q8IYL9 337 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 KLHL23Q8NBE8 558 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 CALML6Q8TD86 181 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 UHRF1Q96T88 793 aaPredicted RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 PRPF18Q99633 342 aaKnown RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 CATSPERBQ9H7T0 1116 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 ARNT2Q9HBZ2 717 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 CACNA2D2Q9NY47 1150 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 GTSE1Q9NYZ3 720 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 MTRRQ9UBK8 725 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 SLC2A6Q9UGQ3 507 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 BACE2Q9Y5Z0 518 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 ZNF638Q14966 1978 aaKnown RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 HEATR9A2RTY3 570 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 FBP2O00757 339 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 URODP06132 367 aa12.43□□□□□ -0.42
UBA3-202ENST00000361055 LTA4HP09960 611 aaKnown RBP12.43□□□□□ -0.42
UBA3-202ENST00000361055 OR4Q2P0C623 313 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms