RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SEL1L3Q68CR1 1132 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 CEP68Q76N32 757 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 CAND1Q86VP6 1230 aaKnown RBP15.26■□□□□ 0.03
TPM1-206ENST00000358278 TRIM69Q86WT6 500 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 HORMAD1Q86X24 394 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 SNX19Q92543 992 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 PRRX2Q99811 253 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 IL22Q9GZX6 179 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 COQ6Q9Y2Z9 468 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 ARL5AQ9Y689 179 aa15.26■□□□□ 0.03
TPM1-206ENST00000358278 GOLGA8CPA6NN73 597 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 C2orf81A6NN90 581 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 PSMD11O00231 422 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 AURKAO14965 403 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 MGAT1P26572 445 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 NPY2RP49146 381 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 CRADDP78560 199 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 PDE1BQ01064 536 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 SGCGQ13326 291 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 HLTFQ14527 1009 aaKnown RBP eCLIP15.25■□□□□ 0.03
TPM1-206ENST00000358278 TAF1AQ15573 450 aaPredicted RBP15.25■□□□□ 0.03
TPM1-206ENST00000358278 TRADDQ15628 312 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 HIF1AQ16665 826 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 CCDC38Q502W7 563 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 KIAA0895LQ68EN5 471 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 CASC4Q6P4E1 433 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 PDIK1LQ8N165 341 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 DEFB119Q8N690 84 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 ZBTB44Q8NCP5 570 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 PPHLN1Q8NEY8 458 aaKnown RBP15.25■□□□□ 0.03
TPM1-206ENST00000358278 IFT81Q8WYA0 676 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 KLK6Q92876 244 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 ZFR2Q9UPR6 939 aaKnown RBP15.25■□□□□ 0.03
TPM1-206ENST00000358278 PKP3Q9Y446 797 aa15.25■□□□□ 0.03
TPM1-206ENST00000358278 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 HEATR9A2RTY3 570 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 MEI4A8MW99 385 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 TP73O15350 636 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 HMGCLP35914 325 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 CCR5P51681 352 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 STC1P52823 247 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 ARL4CP56559 192 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 PTSQ03393 145 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 LAMB3Q13751 1172 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 CDKN3Q16667 212 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 TMEM259Q4ZIN3 620 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 SETMARQ53H47 684 aaPredicted RBP15.24■□□□□ 0.03
TPM1-206ENST00000358278 DNAJC21Q5F1R6 531 aaKnown RBP15.24■□□□□ 0.03
TPM1-206ENST00000358278 ZC3H14Q6PJT7 736 aaKnown RBP15.24■□□□□ 0.03
TPM1-206ENST00000358278 LPCAT2Q7L5N7 544 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 HSD11B1LQ7Z5J1 315 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 IFT20Q8IY31 132 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 TMEFF1Q8IYR6 380 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 CADM4Q8NFZ8 388 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 FBXO25Q8TCJ0 367 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 UBXN4Q92575 508 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 ART4Q93070 314 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 C1QTNF7Q9BXJ2 289 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 SYBUQ9NX95 663 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 PKD2L2Q9NZM6 624 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 SAMD15Q9P1V8 674 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 PLXNB3Q9ULL4 1909 aa15.24■□□□□ 0.03
TPM1-206ENST00000358278 HRO43593 1189 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 BUD23O43709 281 aaKnown RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 C1SP09871 688 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 LPOP22079 712 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 ETV3P41162 512 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 MAGEA3P43357 314 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 MSLNQ13421 630 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 CUL1Q13616 776 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 ELF2Q15723 593 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 ZNF284Q2VY69 593 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 BBS9Q3SYG4 887 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 TMC3Q7Z5M5 1100 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 TTC30BQ8N4P2 665 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 ZCCHC9Q8N567 271 aaKnown RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 FOXJ1Q92949 421 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 BIRC7Q96CA5 298 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 HSPA12BQ96MM6 686 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 PWWP2AQ96N64 755 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 SLC17A9Q9BYT1 436 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 FAM129AQ9BZQ8 928 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 BPIFA1Q9NP55 256 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.03
TPM1-206ENST00000358278 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 CCDC78A2IDD5 438 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 SDR42E2A6NKP2 422 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 BHMG1C9JSJ3 638 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 WNT9AO14904 365 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 STX7O15400 261 aaKnown RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 SLC31A1O15431 190 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 LATO43561 262 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 LDB2O43679 373 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 PPFIA2O75334 1257 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 RECQL5O94762 991 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 PAK4O96013 591 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 IGHV4-34P06331 123 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 ADRA1DP25100 572 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms