RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ITPR3Q14573 2671 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 IGHV1OR21-1A0A087WYE8 117 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 CXorf51AA0A1B0GTR3 108 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 STK17BO94768 372 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 CLDN1O95832 211 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 CYP11B1P15538 503 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 AK4P27144 223 aaPredicted RBP15.88■□□□□ 0.13
DDX55-202ENST00000354291 CSF2RBP32927 897 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 MC2RQ01718 297 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 TSR1Q2NL82 804 aaKnown RBP15.88■□□□□ 0.13
DDX55-202ENST00000354291 SLC25A52Q3SY17 297 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 PTPN20Q4JDL3 420 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 TCP11X2Q5H9J9 407 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 DPY19L2P1Q6NXN4 242 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 TMEM71Q6P5X7 295 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 CEACAM20Q6UY09 585 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 FAM131BQ86XD5 332 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 NRROSQ86YC3 692 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 TICAM1Q8IUC6 712 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 BMPERQ8N8U9 685 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 PRR7Q8TB68 274 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 NT5C3BQ969T7 300 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 RNF31Q96EP0 1072 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 AHCYL2Q96HN2 611 aaKnown RBP15.88■□□□□ 0.13
DDX55-202ENST00000354291 GSDMCQ9BYG8 508 aa15.88■□□□□ 0.13
DDX55-202ENST00000354291 TRIT1Q9H3H1 467 aaKnown RBP15.88■□□□□ 0.13
DDX55-202ENST00000354291 SAMSN1Q9NSI8 373 aaKnown RBP15.88■□□□□ 0.13
DDX55-202ENST00000354291 PPARGC1AQ9UBK2 798 aaKnown RBP15.88■□□□□ 0.13
DDX55-202ENST00000354291 FAM170AA1A519 330 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 PRSS38A1L453 326 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 KDELR3O43731 214 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 RFPL1O75677 317 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 RECQL5O94762 991 aaPredicted RBP15.87■□□□□ 0.13
DDX55-202ENST00000354291 PDGFAP04085 211 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 PNMA6AP0CW24 399 aaPredicted RBP15.87■□□□□ 0.13
DDX55-202ENST00000354291 UCHL3P15374 230 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 F8A1P23610 371 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 CDH5P33151 784 aaPredicted RBP15.87■□□□□ 0.13
DDX55-202ENST00000354291 MAN1A1P33908 653 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 STAT1P42224 750 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 GABRB2P47870 512 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 ILF3Q12906 894 aaKnown RBP eCLIP15.87■□□□□ 0.136e-7■□□□□ 8.1
DDX55-202ENST00000354291 AGERQ15109 404 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 CRTC2Q53ET0 693 aaPredicted RBP15.87■□□□□ 0.13
DDX55-202ENST00000354291 CFAP58Q5T655 872 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 SLC30A9Q6PML9 568 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 EXOC2Q96KP1 924 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 DPYSL5Q9BPU6 564 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 STK33Q9BYT3 514 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 MAGEH1Q9H213 219 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 SUV39H2Q9H5I1 410 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 APMAPQ9HDC9 416 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 PLCB1Q9NQ66 1216 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 LMBRD1Q9NUN5 540 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 MFHAS1Q9Y4C4 1052 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 FHOD1Q9Y613 1164 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 RPS6KL1Q9Y6S9 549 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 LRP4O75096 1905 aa15.87■□□□□ 0.13
DDX55-202ENST00000354291 SETD2Q9BYW2 2564 aaPredicted RBP15.86■□□□□ 0.13
DDX55-202ENST00000354291 HIVEP3Q5T1R4 2406 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 DOCK4Q8N1I0 1966 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 RAMP2O60895 175 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 KATNA1O75449 491 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 FURINP09958 794 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 SCNN1AP37088 669 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 MAPKAPK2P49137 400 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 SQSTM1Q13501 440 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 PHLDB2Q86SQ0 1253 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 ZNF761Q86XN6 746 aaPredicted RBP15.86■□□□□ 0.13
DDX55-202ENST00000354291 MSANTD4Q8NCY6 345 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 ENOX1Q8TC92 643 aaKnown RBP15.86■□□□□ 0.13
DDX55-202ENST00000354291 C18orf8Q96DM3 657 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 ZPBPQ9BS86 351 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 NAA15Q9BXJ9 866 aaKnown RBP15.86■□□□□ 0.13
DDX55-202ENST00000354291 ZNF768Q9H5H4 540 aaKnown RBP15.86■□□□□ 0.13
DDX55-202ENST00000354291 WDR26Q9H7D7 661 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 OR12D3Q9UGF7 316 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 POLHQ9Y253 713 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 MAP4K5Q9Y4K4 846 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 OTOGQ6ZRI0 2925 aa15.86■□□□□ 0.13
DDX55-202ENST00000354291 TRBV23OR9-2A0A075B6M9 112 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 ZSCAN5CA6NGD5 496 aaPredicted RBP15.85■□□□□ 0.13
DDX55-202ENST00000354291 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
DDX55-202ENST00000354291 LSM8O95777 96 aaKnown RBP15.85■□□□□ 0.13
DDX55-202ENST00000354291 TPM2P07951 284 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 HOXC4P09017 264 aaPredicted RBP15.85■□□□□ 0.13
DDX55-202ENST00000354291 RHOQP17081 205 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 TRIM23P36406 574 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 DLSTP36957 453 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 STAT5AP42229 794 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 GNPDA1P46926 289 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 MRPL49Q13405 166 aaKnown RBP15.85■□□□□ 0.13
DDX55-202ENST00000354291 FAM102AQ5T9C2 384 aaPredicted RBP15.85■□□□□ 0.13
DDX55-202ENST00000354291 TMEM135Q86UB9 458 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 NLRP14Q86W24 1093 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 NAGSQ8N159 534 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 ESX1Q8N693 406 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 HCAR2Q8TDS4 363 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 FBXO8Q9NRD0 319 aa15.85■□□□□ 0.13
DDX55-202ENST00000354291 MAP10Q9P2G4 905 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms