RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PCDH1Q08174 1060 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 ZBED5Q49AG3 693 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 RAP1GAP2Q684P5 730 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 PLET1Q6UQ28 207 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 C1orf186Q6ZWK4 172 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 MTSS1LQ765P7 747 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 DET1Q7L5Y6 550 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 OR5J2Q8NH18 312 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 WRBO00258 174 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 DHFRP00374 187 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 CLTBP09497 229 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 STAT5AP42229 794 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 GNA12Q03113 381 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 GALNT3Q14435 633 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 CREG2Q8IUH2 290 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 FAM47BQ8NA70 645 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 METTL6Q8TCB7 284 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 HM13Q8TCT9 377 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 CSGALNACT1Q8TDX6 532 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 TMEM159Q96B96 161 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 FAR2Q96K12 515 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 CDRT15Q96T59 188 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 GSDMCQ9BYG8 508 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 PPA2Q9H2U2 334 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 MCUBQ9NWR8 336 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 DPP7Q9UHL4 492 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 ASB3Q9Y575 518 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 MEIS2O14770 477 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 XYLBO75191 536 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 TNNI3P19429 210 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 CRADDP78560 199 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 SLC25A3Q00325 362 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 BCL2L1Q07817 233 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 ZYG11AQ6WRX3 759 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 PIGWQ7Z7B1 504 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 ZNF366Q8N895 744 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 MAELQ96JY0 434 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 NAT9Q9BTE0 207 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 PRRG3Q9BZD7 231 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 RPS6KB2Q9UBS0 482 aa11.11□□□□□ -0.63
SMARCE1-202ENST00000348513 IGSF6O95976 241 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 AP1S2P56377 157 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FKBP1AP62942 108 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 PPP2R2BQ00005 443 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 GSTM4Q03013 218 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ALG1LQ6GMV1 187 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ZDHHC17Q8IUH5 632 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FAM109AQ8N4B1 249 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 NCKIPSDQ9NZQ3 722 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 MED11Q9P086 117 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 MARCH2Q9P0N8 246 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 NDOR1Q9UHB4 597 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 LOC100506127A0A0U1RQW1 187 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 AGPSO00116 658 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 HAT1O14929 419 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 B4GALT5O43286 388 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 PSMD10O75832 226 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 PAEPP09466 180 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 KELP23276 732 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 SLC1A6P48664 564 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 CAPZA1P52907 286 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 MRPS6P82932 125 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 C1DQ13901 141 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ENDOVQ8N8Q3 282 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FAM84AQ96KN4 292 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 C1QTNF1Q9BXJ1 281 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 NFKBIL1Q9UBC1 381 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 AURKAO14965 403 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 CYP3A4P08684 503 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 HOXA10P31260 410 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ZCCHC23Q6ZST2 131 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FAM183BPQ6ZVS7 135 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ZNF438Q7Z4V0 828 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 VSIG10LQ86VR7 867 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 COMMD7Q86VX2 200 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 GATAD2BQ8WXI9 593 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 HAS1Q92839 578 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 GAL3ST3Q96A11 431 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 GAL3ST1Q99999 423 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 MRPL17Q9NRX2 175 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 CHST7Q9NS84 486 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 PCDHA3Q9Y5H8 950 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 NRCAMQ92823 1304 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 J3QRK9 145 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 OR5F1O95221 314 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 CCNB1P14635 433 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 PGAM1P18669 254 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 CD52P31358 61 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 CYP4F8P98187 520 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FAM131AQ6UXB0 335 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FITM2Q8N6M3 262 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FBXL8Q96CD0 374 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 TCEAL7Q9BRU2 100 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ARL8BQ9NVJ2 186 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 IGSF9Q9P2J2 1179 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 ACTL7BQ9Y614 415 aa11.1□□□□□ -0.63
SMARCE1-202ENST00000348513 FER1L4A9Z1Z3 1794 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms