RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 RPS6KL1Q9Y6S9 549 aa19.02■□□□□ 0.64
CHMP4A-201ENST00000347519 ZNF106Q9H2Y7 1883 aaKnown RBP19.02■□□□□ 0.63
CHMP4A-201ENST00000347519 DOCK9Q9BZ29 2069 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 MAGEB16A2A368 324 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 RIPK2O43353 540 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 ERLIN1O75477 346 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 CRTAMO95727 393 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 TTC4O95801 387 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 CYP2A6P11509 494 aaPredicted RBP19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 AOC1P19801 751 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 HSD17B3P37058 310 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 PXNP49023 591 aaPredicted RBP19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 STC1P52823 247 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 ZBTB16Q05516 673 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 CRYMQ14894 314 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 MAP9Q49MG5 647 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 TMEM52BQ4KMG9 183 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 ERAP2Q6P179 960 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 TRMT10BQ6PF06 316 aaKnown RBP19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 TRMT10CQ7L0Y3 403 aaKnown RBP19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 HSD11B1LQ7Z5J1 315 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 FAM124AQ86V42 546 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 PALM2Q8IXS6 379 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 PGBD3Q8N328 593 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 CBARPQ8N350 705 aaPredicted RBP19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 PTCD2Q8WV60 388 aaKnown RBP19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 ANKRD7Q92527 254 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 TRABDQ9H4I3 376 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 ZFYVE1Q9HBF4 777 aa19.01■□□□□ 0.63
CHMP4A-201ENST00000347519 GPR37L1O60883 481 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 USP1O94782 785 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 LPOP22079 712 aaPredicted RBP19■□□□□ 0.63
CHMP4A-201ENST00000347519 PSMA3P25788 255 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 ARNTP27540 789 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 SUOXP51687 545 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 SPANXN3Q5MJ09 141 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 LIPIQ6XZB0 460 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 C3orf62Q6ZUJ4 267 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 MREGQ8N565 214 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 STYXQ8WUJ0 223 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 UBLCP1Q8WVY7 318 aaPredicted RBP19■□□□□ 0.63
CHMP4A-201ENST00000347519 RAB7BQ96AH8 199 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 PBXIP1Q96AQ6 731 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 NAT9Q9BTE0 207 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 SUDS3Q9H7L9 328 aaPredicted RBP19■□□□□ 0.63
CHMP4A-201ENST00000347519 VPS37BQ9H9H4 285 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 NLE1Q9NVX2 485 aaPredicted RBP19■□□□□ 0.63
CHMP4A-201ENST00000347519 BCCIPQ9P287 314 aaKnown RBP eCLIP19■□□□□ 0.63
CHMP4A-201ENST00000347519 SCML1Q9UN30 329 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 COQ6Q9Y2Z9 468 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 FAM169AQ9Y6X4 670 aa19■□□□□ 0.63
CHMP4A-201ENST00000347519 C2orf81A6NN90 581 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 K7ESF4 209 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 AP1G1O43747 822 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 MMP20O60882 483 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 PIAS1O75925 651 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 PAPSS2O95340 614 aaPredicted RBP18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 C1QAP02745 245 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 HMGCLP35914 325 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 LIG3P49916 1009 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 TPMTP51580 245 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 ACVR1Q04771 509 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 ELP6Q0PNE2 266 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 TTC31Q49AM3 519 aaPredicted RBP18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 RASSF3Q86WH2 238 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 TBATAQ96M53 351 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 SRPK1Q96SB4 655 aaKnown RBP18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 TPSD1Q9BZJ3 242 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 ITM2CQ9NQX7 267 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 SMYD2Q9NRG4 433 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 USP36Q9P275 1121 aaKnown RBP18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 FKBPLQ9UIM3 349 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 RIMKLBQ9ULI2 386 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 EML5Q05BV3 1969 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 PLXNA2O75051 1894 aa18.99■□□□□ 0.63
CHMP4A-201ENST00000347519 CCDC162PA2VCL2 907 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 OR51F1A6NGY5 319 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 GOLGA8KD6RF30 607 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 GOLGA8TH3BQL2 631 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 STX7O15400 261 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 PLRG1O43660 514 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 APBB3O95704 486 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 POLBP06746 335 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 ACADMP11310 421 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 BPIP17213 487 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 CXCL12P48061 93 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 ARCN1P48444 511 aaKnown RBP18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 ADPRHP54922 357 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 ARHGEF7Q14155 803 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 SLC29A2Q14542 456 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 USP30Q70CQ3 517 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 NLRP9Q7RTR0 991 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 CCNJLQ8IV13 435 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 FRMD1Q8N878 549 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 TMEM105Q8N8V8 129 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 PNPLA1Q8N8W4 532 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 OR14C36Q8NHC7 312 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 GSDMBQ8TAX9 411 aa18.98■□□□□ 0.63
CHMP4A-201ENST00000347519 HDAC10Q969S8 669 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms