RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 LINGO1Q96FE5 620 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 CCDC166P0CW27 439 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 ACP5P13686 325 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 CHN1P15882 459 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 CCNHP51946 323 aaPredicted RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 PLK1P53350 603 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 CYP51A1Q16850 503 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 LAYNQ6UX15 382 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 ADAMTSL2Q86TH1 951 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 AVL9Q8NBF6 648 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 GBA3Q9H227 469 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 PAK6Q9NQU5 681 aaPredicted RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 HCFC1R1Q9NWW0 138 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 SNX6Q9UNH7 406 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 HPCAL1P37235 193 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 CCR4P51679 360 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 TBX2Q13207 712 aaPredicted RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 CAPN13Q6MZZ7 669 aaPredicted RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 AMZ2Q86W34 360 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 SELENOMQ8WWX9 145 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 NTAN1Q96AB6 310 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 NR1H4Q96RI1 486 aaPredicted RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 MYO9BQ13459 2157 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 MYO1GB0I1T2 1018 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 WDR47O94967 919 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 MARCKSL1P49006 195 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 FGF13Q92913 245 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 PLEKHA8Q96JA3 519 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 DPY30Q9C005 99 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 OR10H1Q9Y4A9 318 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 TRIM43BA6NCK2 446 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 UPK3BL1B0FP48 263 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 UPK3BL2E5RIL1 263 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 NOMO1Q15155 1222 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 PFKFB4Q16877 469 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 CCDC153Q494R4 210 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 MARCH8Q5T0T0 291 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 CERS6Q6ZMG9 384 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 TMEM110Q86TL2 294 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 CAMK1DQ8IU85 385 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 TRIM43Q96BQ3 446 aaPredicted RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 ZNF599Q96NL3 588 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 ZNF556Q9HAH1 456 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 KRCC1Q9NPI7 259 aaPredicted RBP12.83□□□□□ -0.36
LIN54-201ENST00000340417 FNIP2Q9P278 1114 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 ZNF711Q9Y462 761 aa12.83□□□□□ -0.36
LIN54-201ENST00000340417 C2orf71A6NGG8 1288 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 TULP2O00295 520 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 RGS14O43566 566 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 IL10P22301 178 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 GNA13Q14344 377 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 N4BP2L1Q5TBK1 243 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 ZCCHC8Q6NZY4 707 aaKnown RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 RTL10Q7L3V2 364 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 UBE2ZQ9H832 354 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 AURKCQ9UQB9 309 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 ENO1P06733 434 aaKnown RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 EEF1B2P24534 225 aaKnown RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 VIPR1P32241 457 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 SCNN1AP37088 669 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 CTSOP43234 321 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 RPL21P46778 160 aaKnown RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 NFATC2Q13469 925 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 CERCAMQ5T4B2 595 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 C11orf74Q86VG3 221 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 TEX9Q8N6V9 391 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 EPS8L3Q8TE67 593 aaKnown RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 POMKQ9H5K3 350 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 C9J4A7 227 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 PLOD1Q02809 727 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 C1orf146Q5VVC0 180 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 ANKRD54Q6NXT1 300 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 CRELD2Q6UXH1 353 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 PLD5Q8N7P1 536 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 DTNBP1Q96EV8 351 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 SDCBP2Q9H190 292 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 PIGVQ9NUD9 493 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 A0A1W2PP55 124 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 A8MU76 341 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 AGXTP21549 392 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 INCA1Q0VD86 236 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 CTBP1Q13363 440 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 FAM26DQ5JW98 314 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 SLC36A4Q6YBV0 504 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 SYT12Q8IV01 421 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 ZBTB2Q8N680 514 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 GBP7Q8N8V2 638 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 SLC35F5Q8WV83 523 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 TTLL2Q9BWV7 592 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 SEMA4BQ9NPR2 832 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 BRWD3Q6RI45 1802 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 GMNCA6NCL1 334 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 RNF225M0QZC1 329 aaPredicted RBP12.82□□□□□ -0.36
LIN54-201ENST00000340417 SPATA22Q8NHS9 363 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 AIF1LQ9BQI0 150 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 KLHL28Q9NXS3 571 aa12.82□□□□□ -0.36
LIN54-201ENST00000340417 TEKT2Q9UIF3 430 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms