RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 GYG2O15488 501 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 BUD23O43709 281 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 CRTAMO95727 393 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 HDCP19113 662 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 CES1P23141 567 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 RGRP47804 291 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 GRIA4P48058 902 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ACVR1Q04771 509 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ASPHQ12797 758 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 RCN2Q14257 317 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 E2F5Q15329 346 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 TXNDC8Q6A555 127 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 MRNIPQ6NTE8 343 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 KLC3Q6P597 504 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ZNF783Q6ZMS7 281 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ATG14Q6ZNE5 492 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 LDB1Q86U70 411 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 CARNMT1Q8N4J0 409 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ZNF781Q8N8C0 355 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ARL14EPQ8N8R7 260 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 HJURPQ8NCD3 748 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 SCG3Q8WXD2 468 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 SMG7Q92540 1137 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 ITFG2Q969R8 447 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 NUDCD1Q96RS6 583 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 MRPL57Q9BQC6 102 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 BTBD10Q9BSF8 475 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 GATA5Q9BWX5 397 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 SUDS3Q9H7L9 328 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 UBE2ZQ9H832 354 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 GPAMQ9HCL2 828 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ZNF334Q9HCZ1 680 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 DNAJC28Q9NX36 388 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 MARCH4Q9P2E8 410 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 SORCS3Q9UPU3 1222 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 EYSQ5T1H1 3165 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 OR51F1A6NGY5 319 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 A8MUI8 341 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 CAPN14A8MX76 684 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 DIAPH2O60879 1101 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 TBL1XO60907 577 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 RPP40O75818 363 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 FGF19O95750 216 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 F11P03951 625 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 CKMP06732 381 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 SBK3P0C264 359 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ALOX15P16050 662 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 CR2P20023 1033 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 GABRR2P28476 465 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 CLNS1AP54105 237 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 NAGLUP54802 743 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ARF5P84085 180 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ILF2Q12905 390 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 CDH18Q13634 790 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 CSHL1Q14406 222 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ATAT1Q5SQI0 421 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 RARS2Q5T160 578 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 HECTD2Q5U5R9 776 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 AGAP9Q5VTM2 703 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 LONP2Q86WA8 852 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 SUSD6Q92537 303 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 HLA-CQ95604 372 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ANKRD27Q96NW4 1050 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 GPR78Q96P69 363 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 OLFM1Q99784 485 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 TDRD1Q9BXT4 1180 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 DRC3Q9H069 523 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 ILKAPQ9H0C8 392 aaPredicted RBP11.1□□□□□ -0.63
LRP1-202ENST00000338962 CDH19Q9H159 772 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 VPS28Q9UK41 221 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 VWA7Q9Y334 891 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 CPQQ9Y646 472 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 REV3LO60673 3130 aa11.1□□□□□ -0.63
LRP1-202ENST00000338962 XIRP2A4UGR9 3374 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 TARM1B6A8C7 271 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 CD3EAPO15446 510 aaKnown RBP11.09□□□□□ -0.63
LRP1-202ENST00000338962 S1PR4O95977 384 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 GOT2P00505 430 aaKnown RBP11.09□□□□□ -0.63
LRP1-202ENST00000338962 ENO1P06733 434 aaKnown RBP11.09□□□□□ -0.63
LRP1-202ENST00000338962 RHOP08100 348 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 MYL4P12829 197 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 IDH3AP50213 366 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 NSUN2Q08J23 767 aaKnown RBP eCLIP11.09□□□□□ -0.63
LRP1-202ENST00000338962 DLG1Q12959 904 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 USP4Q13107 963 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 PTPRCAPQ14761 206 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 CYTH1Q15438 398 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 PRSS36Q5K4E3 855 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 CES5AQ6NT32 575 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 LINGO4Q6UY18 593 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 GAREM2Q75VX8 874 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 MAVSQ7Z434 540 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 GLT6D1Q7Z4J2 308 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 GRASPQ7Z6J2 395 aaPredicted RBP11.09□□□□□ -0.63
LRP1-202ENST00000338962 PNPLA1Q8N8W4 532 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 TDRD5Q8NAT2 981 aaKnown RBP11.09□□□□□ -0.63
LRP1-202ENST00000338962 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
LRP1-202ENST00000338962 MAFAQ8NHW3 353 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms