RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 KLHDC8BQ8IXV7 354 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 TOP6BLQ8N6T0 577 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 PGAP3Q96FM1 320 aaPredicted RBP23.65■■□□□ 1.38
TSKU-201ENST00000333090 CRTAC1Q9NQ79 661 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 CNGB3Q9NQW8 809 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 ARPC2O15144 300 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 INPP4BO15327 924 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 MTHFD1P11586 935 aaKnown RBP23.65■■□□□ 1.38
TSKU-201ENST00000333090 UGT1A1P22309 533 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 UGT1A4P22310 534 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 UGT1A3P35503 534 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 UGT1A5P35504 534 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 MAGEA10P43363 369 aaPredicted RBP23.65■■□□□ 1.38
TSKU-201ENST00000333090 GEMP55040 296 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 GPR158Q5T848 1215 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 DCLRE1AQ6PJP8 1040 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 ADGRG5Q8IZF4 528 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 PTCD2Q8WV60 388 aaKnown RBP23.65■■□□□ 1.38
TSKU-201ENST00000333090 PLEKHA8Q96JA3 519 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 FEM1CQ96JP0 617 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 MYRFLQ96LU7 910 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 MRM3Q9HC36 420 aaKnown RBP23.65■■□□□ 1.38
TSKU-201ENST00000333090 ENTPD7Q9NQZ7 604 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 ACTR3BQ9P1U1 418 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 CACNG4Q9UBN1 327 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 NDUFAF1Q9Y375 327 aa23.65■■□□□ 1.38
TSKU-201ENST00000333090 RASAL1O95294 804 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 F9P00740 461 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 CCNCP24863 283 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 TTKP33981 857 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 CXCR3P49682 368 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 ZNF678Q5SXM1 525 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 LCN8Q6JVE9 175 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 OGFOD2Q6N063 350 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 LDB1Q86U70 411 aaPredicted RBP23.64■■□□□ 1.38
TSKU-201ENST00000333090 DDIASQ8IXT1 998 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 DHRSXQ8N5I4 330 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 TRMOQ9BU70 441 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 DNAJC15Q9Y5T4 150 aa23.64■■□□□ 1.38
TSKU-201ENST00000333090 FXYD1O00168 92 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 PPP6CO00743 305 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 ACOX3O15254 700 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 ZBTB11O95625 1053 aaPredicted RBP23.64■■□□□ 1.37
TSKU-201ENST00000333090 ADRA1AP35348 466 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 IREB2P48200 963 aaKnown RBP23.64■■□□□ 1.37
TSKU-201ENST00000333090 BNIP2Q12982 314 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 PLCL1Q15111 1095 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 TMTC4Q5T4D3 741 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 HECTD2Q5U5R9 776 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 C16orf87Q6PH81 154 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 DDHD1Q8NEL9 900 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 ZMIZ2Q8NF64 920 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 MAGEE2Q8TD90 523 aaPredicted RBP23.64■■□□□ 1.37
TSKU-201ENST00000333090 UBXN10Q96LJ8 280 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 DOK1Q99704 481 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 BLOC1S6Q9UL45 172 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 PAIP2BQ9ULR5 123 aaKnown RBP23.64■■□□□ 1.37
TSKU-201ENST00000333090 MYLKQ15746 1914 aa23.64■■□□□ 1.37
TSKU-201ENST00000333090 HLA-DQB2P05538 268 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 HSD17B1P14061 328 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 PORP16435 677 aaPredicted RBP23.63■■□□□ 1.37
TSKU-201ENST00000333090 SLC6A2P23975 617 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 PM20D1Q6GTS8 502 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 PRMT9Q6P2P2 845 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 KIAA0408Q6ZU52 694 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 CD320Q9NPF0 282 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 RBM22Q9NW64 420 aaKnown RBP eCLIP23.63■■□□□ 1.37
TSKU-201ENST00000333090 GPR32O75388 356 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 CLCN5P51795 746 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 SH3BP2P78314 561 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 GRB7Q14451 532 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 TGFBIQ15582 683 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 UGT3A2Q3SY77 523 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 TAC4Q86UU9 113 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 CLYBLQ8N0X4 340 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 MIER2Q8N344 545 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 TRPV3Q8NET8 790 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 TSPAN17Q96FV3 270 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 MRGPRX2Q96LB1 330 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 SMPD3Q9NY59 655 aaPredicted RBP23.63■■□□□ 1.37
TSKU-201ENST00000333090 TIMM13Q9Y5L4 95 aaPredicted RBP23.63■■□□□ 1.37
TSKU-201ENST00000333090 OTOFQ9HC10 1997 aa23.63■■□□□ 1.37
TSKU-201ENST00000333090 KANSL1LA0AUZ9 987 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 MT-ND1P03886 318 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 OCM2P0CE71 109 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 OCMP0CE72 109 aaPredicted RBP23.62■■□□□ 1.37
TSKU-201ENST00000333090 GJA5P36382 358 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 CAPGP40121 348 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 UNC50Q53HI1 259 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 ARHGAP12Q8IWW6 846 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 MINDY1Q8N5J2 469 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 MYBPHLA2RUH7 354 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 GFAPP14136 432 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 TMEM207Q6UWW9 146 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 SPRED1Q7Z699 444 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 PIM3Q86V86 326 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 ANKRD13AQ8IZ07 590 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 RYBPQ8N488 228 aaPredicted RBP23.62■■□□□ 1.37
TSKU-201ENST00000333090 PCED1BQ96HM7 432 aa23.62■■□□□ 1.37
TSKU-201ENST00000333090 IL12RB2Q99665 862 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms