RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 KCNT1Q5JUK3 1230 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 SCYL2Q6P3W7 929 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 FBXL19Q6PCT2 694 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 BRAT1Q6PJG6 821 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 RFX8Q6ZV50 586 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 CBLL1Q75N03 491 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 PYROXD2Q8N2H3 581 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 GALNT15Q8N3T1 639 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 CHST14Q8NCH0 376 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 C2CD4AQ8NCU7 369 aaPredicted RBP6.4□□□□□ -1.38
SMG1-201ENST00000330588 OR2I1PQ8NGU4 316 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 FATE1Q969F0 183 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 C1QTNF7Q9BXJ2 289 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 KLC2Q9H0B6 622 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 IL21RQ9HBE5 538 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 KLHL11Q9NVR0 708 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 UVRAGQ9P2Y5 699 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 LHX3Q9UBR4 397 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 UBA2Q9UBT2 640 aaPredicted RBP6.4□□□□□ -1.38
SMG1-201ENST00000330588 IP6K2Q9UHH9 426 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 DNAI1Q9UI46 699 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 ZFR2Q9UPR6 939 aaKnown RBP6.4□□□□□ -1.38
SMG1-201ENST00000330588 SLCO1B1Q9Y6L6 691 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 CSNK1G3Q9Y6M4 447 aa6.4□□□□□ -1.38
SMG1-201ENST00000330588 ASCC3Q8N3C0 2202 aaKnown RBP6.4□□□□□ -1.38
SMG1-201ENST00000330588 NUMA1Q14980 2115 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 FAM95CA0A1B0GW59 222 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 A0A1W2PQU0 124 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 C16orf96A6NNT2 1141 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 TMEM110-MUSTN1A8MSY1 372 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 BUB1O43683 1085 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 CREB3O43889 395 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 CELA3AP09093 270 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 NFKBIAP25963 317 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 MAN1A1P33908 653 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 ARL4AP40617 200 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 RHOAP61586 193 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 AP1S1P61966 158 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 YPEL5P62699 121 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 SHBQ15464 509 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 TMEM52BQ4KMG9 183 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 SPECC1LQ69YQ0 1117 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 CDPF1Q6NVV7 123 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 ALKBH5Q6P6C2 394 aaKnown RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 UNQ6494/PRO21346Q6UXR6 183 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 GDPD4Q6W3E5 623 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 CCNI2Q6ZMN8 369 aaPredicted RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 RINLQ6ZS11 566 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 PARS2Q7L3T8 475 aaKnown RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 TMPRSS7Q7RTY8 843 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 POLNQ7Z5Q5 900 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 SPATS2Q86XZ4 545 aaKnown RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 ARHGAP12Q8IWW6 846 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 RAVER1Q8IY67 606 aaKnown RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 SDR16C5Q8N3Y7 309 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 OR8K1Q8NGG5 319 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 GRIN3AQ8TCU5 1115 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 HMCESQ96FZ2 354 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 PEBP4Q96S96 227 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 TRIM56Q9BRZ2 755 aaKnown RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 SCNM1Q9BWG6 230 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 SLC17A9Q9BYT1 436 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 TNKS2Q9H2K2 1166 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 CLEC4MQ9H2X3 399 aaPredicted RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 DHX35Q9H5Z1 703 aaKnown RBP6.4□□□□□ -1.39
SMG1-201ENST00000330588 ZDHHC6Q9H6R6 413 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 NCKIPSDQ9NZQ3 722 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 FTSJ1Q9UET6 329 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 AMACRQ9UHK6 382 aa6.4□□□□□ -1.39
SMG1-201ENST00000330588 PCNX2A6NKB5 2137 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 A0A087X0T9 212 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 SPTY2D1-AS1A0A0U1RR47 76 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.39□□□□□ -1.39
SMG1-201ENST00000330588 SPAARA0A1B0GVQ0 90 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 MYO1FO00160 1098 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 ENC1O14682 589 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 FPGTO14772 594 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
SMG1-201ENST00000330588 SOCS5O75159 536 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 PCDH8O95206 1070 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 B3GALT4O96024 378 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 ITGAVP06756 1048 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 TPM1P09493 284 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 H2AFZP0C0S5 128 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 FAM228BP0C875 321 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 THEGLP0DJG4 465 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 DRD2P14416 443 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 ERCC2P18074 760 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 PEX5P50542 639 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 PFN3P60673 137 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 HNRNPKP61978 463 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMG1-201ENST00000330588 SLC25A11Q02978 314 aaKnown RBP6.39□□□□□ -1.39
SMG1-201ENST00000330588 PCDH1Q08174 1060 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 SGCGQ13326 291 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 PTK2BQ14289 1009 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 PDK2Q15119 407 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 TCEAL1Q15170 157 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 CYTH1Q15438 398 aa6.39□□□□□ -1.39
SMG1-201ENST00000330588 SMAD1Q15797 465 aaKnown RBP6.39□□□□□ -1.39
SMG1-201ENST00000330588 SLC18A3Q16572 532 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms