RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 GPALPP1Q8IXQ4 340 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 TRMOQ9BU70 441 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ATP13A3Q9H7F0 1226 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 HACL1Q9UJ83 578 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 WRBO00258 174 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ZNF157P51786 506 aaPredicted RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 FCGRTP55899 365 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 POU5F1Q01860 360 aaKnown RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 EFR3AQ14156 821 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 MSANTD1Q6ZTZ1 278 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ATCAYQ86WG3 371 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ZDHHC6Q9H6R6 413 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 E5RJQ4 531 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 AZIN1O14977 448 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 TIPRLO75663 272 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 SNX4O95219 450 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 PIGKQ92643 395 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 EHD4Q9H223 541 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 TSPAN3O60637 253 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 CRADDP78560 199 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ZMYND11Q15326 602 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 CXorf57Q6NSI4 855 aaKnown RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 DOK6Q6PKX4 331 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 SNX15Q9NRS6 342 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 PMF1-BGLAPU3KQ54 211 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 USP12O75317 370 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 GATBO75879 557 aaKnown RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 PGRP06401 933 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 CDH5P33151 784 aaPredicted RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 PSMD5Q16401 504 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 FBXL19Q6PCT2 694 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 ZPBP2Q6X784 338 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 RAD51AP1Q96B01 352 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 FBXO10Q9UK96 956 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 SNRPD1P62314 119 aaKnown RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 ZNF730Q6ZMV8 503 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 DNAAF5Q86Y56 855 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 DSELQ8IZU8 1212 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 INO80EQ8NBZ0 244 aaPredicted RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 SLC6A15Q9H2J7 730 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 CARD8Q9Y2G2 431 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 GNB5O14775 395 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 PITPNAQ00169 270 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 POLNQ7Z5Q5 900 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 AMIGO2Q86SJ2 522 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 JAZF1Q86VZ6 243 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 LEMD2Q8NC56 503 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 EGFL7Q9UHF1 273 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 LIPEQ05469 1076 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 CPTPQ5TA50 214 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 METTL7BQ6UX53 244 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 CLPTM1LQ96KA5 538 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 NXF3Q9H4D5 531 aaKnown RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 GULP1Q9UBP9 304 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 NCKAP1Q9Y2A7 1128 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 A0A0G2JLW4 131 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 TPK1Q9H3S4 243 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 SEMA3GQ9NS98 782 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 FAM205AQ6ZU69 1335 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 NOS2P35228 1153 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 HNF4AP41235 474 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 SLC4A11Q8NBS3 891 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 EZH1Q92800 747 aaPredicted RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 TAMM41Q96BW9 452 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 NPAS2Q99743 824 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 SNTG2Q9NY99 539 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 ZNF806P0C7X5 589 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 BACE1P56817 501 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 EIF2S3LQ2VIR3 472 aaKnown RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 FNDC3BQ53EP0 1204 aaKnown RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 WDR59Q6PJI9 974 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 DET1Q7L5Y6 550 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 GPR156Q8NFN8 814 aa16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 DNAJA4Q8WW22 397 aaPredicted RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 GFM1Q96RP9 751 aaKnown RBP16.88■□□□□ 0.29
SMCHD1-201ENST00000320876 ABHD14A-ACY1A0A1B0GW23 586 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 PGM5Q15124 567 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 SLC27A1Q6PCB7 646 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 GSTCDQ8NEC7 633 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 RAB2BQ8WUD1 216 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 TP53INP1Q96A56 240 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 ASB8Q9H765 288 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 MAN2B2Q9Y2E5 1009 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 PRAMEF33A0A0G2JMD5 474 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 PRAMEF10O60809 474 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 GSTT2BP0CG30 244 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 WNT8BQ93098 351 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 MGME1Q9BQP7 344 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 EHD1Q9H4M9 534 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 TCRBV9S1A1TA0A576 114 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 AKAP8O43823 692 aaKnown RBP16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 TM7SF2O76062 418 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 RD3Q7Z3Z2 195 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 P2RY8Q86VZ1 359 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 OR2T12Q8NG77 320 aa16.87■□□□□ 0.29
SMCHD1-201ENST00000320876 DNAJC28Q9NX36 388 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms