RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 FADS3Q9Y5Q0 445 aa13.62□□□□□ -0.23
PRPF18-201ENST00000320054 ARL5AQ9Y689 179 aa13.62□□□□□ -0.23
PRPF18-201ENST00000320054 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.62□□□□□ -0.23
PRPF18-201ENST00000320054 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
PRPF18-201ENST00000320054 DOCK9Q9BZ29 2069 aa13.62□□□□□ -0.23
PRPF18-201ENST00000320054 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 ZCWPW2A0A1B0GU75 182 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 A0A1W2PP55 124 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 TMEM221A6NGB7 291 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 M0R296 226 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 PLK4O00444 970 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 STX7O15400 261 aaKnown RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 TSPAN6O43657 245 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 RNASEH2AO75792 299 aaKnown RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 CLDN7O95471 211 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 IGLV3-19P01714 112 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 ACADMP11310 421 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 PAMP19021 973 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 AOC1P19801 751 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 SSTR1P30872 391 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 PHBP35232 272 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 HSD17B3P37058 310 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 HADHAP40939 763 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 CLCN5P51795 746 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 STC1P52823 247 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 PTPN5P54829 565 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 TAS2R38P59533 333 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 MTAPQ13126 283 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 ARHGEF7Q14155 803 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 UAP1Q16222 522 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 CNGA3Q16281 694 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 LRRC73Q5JTD7 316 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 LRRC66Q68CR7 880 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 KIAA0930Q6ICG6 404 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 ESRP1Q6NXG1 681 aaKnown RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 KIAA1324Q6UXG2 1013 aaKnown RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 C3orf62Q6ZUJ4 267 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 TSPAN33Q86UF1 283 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 RASSF3Q86WH2 238 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 CAMKK1Q8N5S9 505 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 OR13J1Q8NGT2 312 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 UBLCP1Q8WVY7 318 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 HMGB4Q8WW32 186 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 PBXIP1Q96AQ6 731 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 EID2BQ96D98 161 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 MFSD3Q96ES6 412 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 ZNF778Q96MU6 729 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 FCRL3Q96P31 734 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 TRIM56Q9BRZ2 755 aaKnown RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 SLC6A17Q9H1V8 727 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 ITM2CQ9NQX7 267 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 C2orf42Q9NWW7 574 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 MOCS1Q9NZB8 636 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 USP36Q9P275 1121 aaKnown RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 NFKBIL1Q9UBC1 381 aaPredicted RBP13.61□□□□□ -0.23
PRPF18-201ENST00000320054 SERGEFQ9UGK8 458 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 PKP3Q9Y446 797 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 KCTD3Q9Y597 815 aa13.61□□□□□ -0.23
PRPF18-201ENST00000320054 A0A087WUV0 522 aaPredicted RBP13.6□□□□□ -0.23
PRPF18-201ENST00000320054 H7C0S8 307 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 PLRG1O43660 514 aaKnown RBP13.6□□□□□ -0.23
PRPF18-201ENST00000320054 RPP40O75818 363 aaKnown RBP13.6□□□□□ -0.23
PRPF18-201ENST00000320054 ACSL3O95573 720 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 APBB3O95704 486 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 PDGFBP01127 241 aaPredicted RBP13.6□□□□□ -0.23
PRPF18-201ENST00000320054 DCNP07585 359 aaKnown RBP13.6□□□□□ -0.23
PRPF18-201ENST00000320054 STX2P32856 288 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 CCR3P51677 355 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 PTSQ03393 145 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 LONRF1Q17RB8 773 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 ZDHHC20Q5W0Z9 365 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 CES3Q6UWW8 571 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 LIPIQ6XZB0 460 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 CACUL1Q86Y37 369 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 OR4K2Q8NGD2 314 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 GANCQ8TET4 914 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 CDKN2AIPNLQ96HQ2 116 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 SGSM3Q96HU1 749 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 DNAJC1Q96KC8 554 aaKnown RBP13.6□□□□□ -0.23
PRPF18-201ENST00000320054 KDM4CQ9H3R0 1056 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 VPS37BQ9H9H4 285 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 RAD18Q9NS91 495 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 SLC2A6Q9UGQ3 507 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 ITM2BQ9Y287 266 aa13.6□□□□□ -0.23
PRPF18-201ENST00000320054 CACNA1IQ9P0X4 2223 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 TCRBV9S1A1TA0A576 114 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 A8MX80 341 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 NEMP1O14524 444 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 BUD23O43709 281 aaKnown RBP13.59□□□□□ -0.23
PRPF18-201ENST00000320054 C1SP09871 688 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 NUDT17P0C025 328 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 ELFN1P0C7U0 828 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 CXCL12P48061 93 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 ARCN1P48444 511 aaKnown RBP13.59□□□□□ -0.23
PRPF18-201ENST00000320054 LIG3P49916 1009 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 TPMTP51580 245 aa13.59□□□□□ -0.23
PRPF18-201ENST00000320054 SEMG2Q02383 582 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms