RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 OR1E3Q8WZA6 343 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 PDXPQ96GD0 296 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 CYP4F12Q9HCS2 524 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 FGF22Q9HCT0 170 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 THSD1Q9NS62 852 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 RBM22Q9NW64 420 aaKnown RBP eCLIP17.77■□□□□ 0.44
TPM1-203ENST00000317516 WDFY3Q8IZQ1 3526 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 TMX2-CTNND1H3BSU7 103 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 MFSD11O43934 449 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 MYCLP1P12525 358 aaPredicted RBP17.76■□□□□ 0.43
TPM1-203ENST00000317516 CCNB1P14635 433 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 GM2AP17900 193 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 TAS2R40P59535 323 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 MESDQ14696 234 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 TCEA2Q15560 299 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 KYQ8NBH2 561 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 ZNF248Q8NDW4 579 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 PIH1D2Q8WWB5 315 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 MAML1Q92585 1016 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 DTD2Q96FN9 168 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 ZNF830Q96NB3 372 aaPredicted RBP17.76■□□□□ 0.43
TPM1-203ENST00000317516 MCCC1Q96RQ3 725 aaPredicted RBP17.76■□□□□ 0.43
TPM1-203ENST00000317516 LGR4Q9BXB1 951 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 PACSIN1Q9BY11 444 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 TEX101Q9BY14 249 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 SYNDIG1Q9H7V2 258 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 DNPEPQ9ULA0 475 aa17.76■□□□□ 0.43
TPM1-203ENST00000317516 PRSS38A1L453 326 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 GOLGA6CA6NDK9 693 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 GOLGA6BA6NDN3 693 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 NPIPB15A6NHN6 443 aaPredicted RBP17.75■□□□□ 0.43
TPM1-203ENST00000317516 GOLGA6DP0CG33 693 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 ITPKBP27987 946 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 TEAD1P28347 426 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 ETV3P41162 512 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 PCBP4P57723 403 aaKnown RBP17.75■□□□□ 0.43
TPM1-203ENST00000317516 PEX6Q13608 980 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 ODF2Q5BJF6 829 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 OGFOD3Q6PK18 319 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 IGF2-ASQ6U949 168 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 Q6ZVL8 140 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 HSD11B1LQ7Z5J1 315 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 VSTM4Q8IW00 320 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 CCNYQ8ND76 341 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 GPR156Q8NFN8 814 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 SLC35G2Q8TBE7 412 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 KIAA1524Q8TCG1 905 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 FAF2Q96CS3 445 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 ATXN7L3BQ96GX2 97 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 LGMNQ99538 433 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 MAK16Q9BXY0 300 aaKnown RBP17.75■□□□□ 0.43
TPM1-203ENST00000317516 TMEM168Q9H0V1 697 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 DPEP2Q9H4A9 486 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 MRPL40Q9NQ50 206 aaKnown RBP17.75■□□□□ 0.43
TPM1-203ENST00000317516 ABHD10Q9NUJ1 306 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 GOLGA6AQ9NYA3 693 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 TTLL3Q9Y4R7 772 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 ENTPD2Q9Y5L3 495 aa17.75■□□□□ 0.43
TPM1-203ENST00000317516 NTN3O00634 580 aaPredicted RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 FZD6O60353 706 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 PYGLP06737 847 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 GLB1P16278 677 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 ZNF30P17039 623 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 CTPS1P17812 591 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 LHCGRP22888 699 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 KDELR1P24390 212 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 RPL26P61254 145 aaKnown RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 DPTQ07507 201 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 CCDC173Q0VFZ6 552 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 C3orf38Q5JPI3 329 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 ALG1LQ6GMV1 187 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 RAET1GQ6H3X3 334 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 HEATR4Q86WZ0 1026 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 ARL14Q8N4G2 192 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 WDR36Q8NI36 951 aaKnown RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 CCDC74AQ96AQ1 378 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 RNF157Q96PX1 679 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 GFM1Q96RP9 751 aaKnown RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 GSDMCQ9BYG8 508 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 NHEJ1Q9H9Q4 299 aaPredicted RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 CARS2Q9HA77 564 aaKnown RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 RPL26L1Q9UNX3 145 aaKnown RBP17.74■□□□□ 0.43
TPM1-203ENST00000317516 SATB2Q9UPW6 733 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 PCDHGA8Q9Y5G5 932 aa17.74■□□□□ 0.43
TPM1-203ENST00000317516 LRRD1A4D1F6 860 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 ZNF487B1APH4 448 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 MFAP3LO75121 409 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 MAP3K6O95382 1288 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 PDHA1P08559 390 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 PNLIPP16233 465 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 MLLT3P42568 568 aaPredicted RBP17.73■□□□□ 0.43
TPM1-203ENST00000317516 GPR1P46091 355 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 CDK3Q00526 305 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 DSC2Q02487 901 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 GBE1Q04446 702 aa17.73■□□□□ 0.43
TPM1-203ENST00000317516 ILF3Q12906 894 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM1-203ENST00000317516 BROXQ5VW32 411 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms