RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ADSLP30566 484 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 ATP5C1P36542 298 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 GMFBP60983 142 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 BNIP2Q12982 314 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 USP4Q13107 963 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 EIF2B5Q13144 721 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 LACTB2Q53H82 288 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 SATL1Q86VE3 508 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 LPPQ93052 612 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 BHMTQ93088 406 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 TOR3AQ9H497 397 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 MAP10Q9P2G4 905 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 PCDHA11Q9Y5I1 949 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 GPC6Q9Y625 555 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 N4BP2Q86UW6 1770 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 EFEMP1Q12805 493 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 PEX6Q13608 980 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 PRPF38BQ5VTL8 546 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 BHLHB9Q6PI77 547 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 PLET1Q6UQ28 207 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 FRMD7Q6ZUT3 714 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 ECHDC2Q86YB7 292 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 MAP4K3Q8IVH8 894 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 TMEM192Q8IY95 271 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 KIAA0895Q8NCT3 520 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 COPS4Q9BT78 406 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 NOL11Q9H8H0 719 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 MOV10Q9HCE1 1003 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 C12orf4Q9NQ89 552 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 CISHQ9NSE2 258 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 PRPF19Q9UMS4 504 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 A0A0B4J269 797 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ZNF879B4DU55 563 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 HOXB8P17481 243 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 CYP3A5P20815 502 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 MYL9P24844 172 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 CAPGP40121 348 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 CDK9P50750 372 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 CYP24A1Q07973 514 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 CAPSQ13938 189 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PPP1R15BQ5SWA1 713 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 MEIOBQ8N635 442 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SERPINB11Q96P15 392 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PGLYRP2Q96PD5 576 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 BARX2Q9UMQ3 279 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 BTN3A1O00481 513 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ENDOD1O94919 500 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ZNF865P0CJ78 1059 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 CRATP43155 626 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 IST1P53990 364 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 OOSP2Q86WS3 158 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ARMC8Q8IUR7 673 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SYT12Q8IV01 421 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 AADATQ8N5Z0 425 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 LRRC52Q8N7C0 313 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PIK3C3Q8NEB9 887 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ARMC5Q96C12 935 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 CELF6Q96J87 481 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 CCDC115Q96NT0 180 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 CCNB1IP1Q9NPC3 277 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 RBM22Q9NW64 420 aaKnown RBP eCLIP8.19□□□□□ -1.12e-13■■■■■ 59.6
VPS41-202ENST00000310301 TMEM216Q9P0N5 145 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 MLXQ9UH92 298 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 RPS6KA6Q9UK32 745 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 RAB26Q9ULW5 256 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SNX7Q9UNH6 387 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 GNEQ9Y223 722 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 N6AMT1Q9Y5N5 214 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 FAM240BA0A1B0GVZ2 78 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 G3V2T6 193 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 TIPRLO75663 272 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 NUDT17P0C025 328 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PRG2P13727 222 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 COX7A2P14406 83 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 HPCAL1P37235 193 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ABCG1P45844 678 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 GRIA4P48058 902 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 GPR15P49685 360 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 GCNT7Q6ZNI0 430 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SLC41A1Q8IVJ1 513 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ADCY4Q8NFM4 1077 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 GRPEL2Q8TAA5 225 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ART4Q93070 314 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 TMEM176AQ96HP8 235 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PHF12Q96QT6 1004 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 TBL1YQ9BQ87 522 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 CIDEBQ9UHD4 219 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 LEF1Q9UJU2 399 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 PCDHGC5Q9Y5F6 944 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 TEX28O15482 410 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 BANF1O75531 89 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 CYP1A1P04798 512 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 POLR2EP19388 210 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 MSX2P35548 267 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 GRSF1Q12849 480 aaKnown RBP eCLIP8.19□□□□□ -1.1
VPS41-202ENST00000310301 CNPY1Q3B7I2 92 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 RNASE12Q5GAN4 147 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 NT5DC1Q5TFE4 455 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 BAP1Q92560 729 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 EMID1Q96A84 441 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms