RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TMEM245Q9H330 911 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 CATSPERZQ9NTU4 200 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 INTS9Q9NV88 658 aaKnown RBP22.55■■□□□ 1.2
IRF3-201ENST00000309877 CD3EAPO15446 510 aaKnown RBP22.55■■□□□ 1.2
IRF3-201ENST00000309877 PRNPP04156 253 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 CTSLP07711 333 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 FOSL2P15408 326 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 CD151P48509 253 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 SLC18A2Q05940 514 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 E2F5Q15329 346 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 TTC19Q6DKK2 380 aaPredicted RBP22.55■■□□□ 1.2
IRF3-201ENST00000309877 TPRG1Q6ZUI0 275 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 SDCCAG8Q86SQ7 713 aaPredicted RBP22.55■■□□□ 1.2
IRF3-201ENST00000309877 ZC3HC1Q86WB0 502 aaKnown RBP22.55■■□□□ 1.2
IRF3-201ENST00000309877 CILP2Q8IUL8 1156 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 STK40Q8N2I9 435 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 DCLK2Q8N568 766 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 BANPQ8N9N5 519 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 MGARPQ8TDB4 240 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 OR8D1Q8WZ84 308 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 HLA-CQ95604 372 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 LYSMD1Q96S90 227 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 KCNK12Q9HB15 430 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 IL17CQ9P0M4 197 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 SUN2Q9UH99 717 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 FKBPLQ9UIM3 349 aa22.55■■□□□ 1.2
IRF3-201ENST00000309877 MTO1Q9Y2Z2 717 aaKnown RBP22.55■■□□□ 1.2
IRF3-201ENST00000309877 KIAA1549LQ6ZVL6 1849 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 A8MX80 341 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 CLDN7O95471 211 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 NFKBIAP25963 317 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 GABRB3P28472 473 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 MPP2Q14168 576 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 FASTKD1Q53R41 847 aaKnown RBP22.54■■□□□ 1.2
IRF3-201ENST00000309877 ZNF805Q5CZA5 627 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 C9orf64Q5T6V5 341 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 GPR150Q8NGU9 434 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 MCMBPQ9BTE3 642 aa22.54■■□□□ 1.2
IRF3-201ENST00000309877 FBRSL1Q9HCM7 1045 aaKnown RBP22.54■■□□□ 1.2
IRF3-201ENST00000309877 FBXO6Q9NRD1 293 aaPredicted RBP22.54■■□□□ 1.2
IRF3-201ENST00000309877 NPIPB15A6NHN6 443 aaPredicted RBP22.53■■□□□ 1.2
IRF3-201ENST00000309877 COPEO14579 308 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 TPP1O14773 563 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 TYROBPO43914 113 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 XPAP23025 273 aaPredicted RBP22.53■■□□□ 1.2
IRF3-201ENST00000309877 TYK2P29597 1187 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 IL12RB1P42701 662 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 TNFRSF4P43489 277 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 SERPINB8P50452 374 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 GNGT1P63211 74 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 SEPT7Q16181 437 aaKnown RBP22.53■■□□□ 1.2
IRF3-201ENST00000309877 CDKN3Q16667 212 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 EGFLAMQ63HQ2 1017 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 CRTC1Q6UUV9 634 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 SH2D5Q6ZV89 423 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 SLC44A3Q8N4M1 653 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 HCAR2Q8TDS4 363 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 ACMSDQ8TDX5 336 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 APOPT1Q96IL0 206 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 MCCC1Q96RQ3 725 aaPredicted RBP22.53■■□□□ 1.2
IRF3-201ENST00000309877 MARCH4Q9P2E8 410 aaPredicted RBP22.53■■□□□ 1.2
IRF3-201ENST00000309877 DKK3Q9UBP4 350 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 FNDC3AQ9Y2H6 1198 aaKnown RBP22.53■■□□□ 1.2
IRF3-201ENST00000309877 STARD13Q9Y3M8 1113 aa22.53■■□□□ 1.2
IRF3-201ENST00000309877 SPECC1L-ADORA2AF8WAN1 911 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 HAUS5O94927 633 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 ALDOAP04075 364 aaKnown RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 PMLP29590 882 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 MC4RP32245 332 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 RPA3P35244 121 aaPredicted RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 LEPRP48357 1165 aaKnown RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 SLC18A1P54219 525 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 ELAVL3Q14576 367 aaKnown RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 GALNT7Q86SF2 657 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 EID2BQ96D98 161 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 GPR22Q99680 433 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 TRPV5Q9NQA5 729 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 PCMTD2Q9NV79 361 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 CACNA2D2Q9NY47 1150 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 TSPAN11A1L157 253 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 KPNA3O00505 521 aaPredicted RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 EPHX1P07099 455 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 CYP2A6P11509 494 aaPredicted RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 OGNP20774 298 aaKnown RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 CTHP32929 405 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 CCNFP41002 786 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 SEMG2Q02383 582 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 LDB1Q86U70 411 aaPredicted RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 TSPAN33Q86UF1 283 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 TMIEQ8NEW7 156 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 DYDC1Q8WWB3 177 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 SGSM3Q96HU1 749 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 ACOX2Q99424 681 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 C19orf43Q9BQ61 176 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 SLC13A1Q9BZW2 595 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 IQCGQ9H095 443 aaKnown RBP22.52■■□□□ 1.2
IRF3-201ENST00000309877 ZDHHC4Q9NPG8 344 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 SNX15Q9NRS6 342 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 B4GALT6Q9UBX8 382 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 HCN2Q9UL51 889 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms