RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PNCKQ6P2M8 343 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 RBM15Q96T37 977 aaKnown RBP eCLIP19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 SLC13A1Q9BZW2 595 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 TRIM5Q9C035 493 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 NRSN2Q9GZP1 204 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 RBSNQ9H1K0 784 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 MRPL40Q9NQ50 206 aaKnown RBP19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 RALYQ9UKM9 306 aaKnown RBP19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 TFR2Q9UP52 801 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 PCDHB1Q9Y5F3 818 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 LOC400499M0QZD8 3231 aa19.84■□□□□ 0.77
PDZRN3-202ENST00000308537 UNC13CQ8NB66 2214 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 SMG1Q96Q15 3661 aaKnown RBP19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 A0A0J9YYE9 177 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 RASGRP1O95267 797 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 TRBC1P01850 177 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 CTPS1P17812 591 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 BLKP51451 505 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 IFI35P80217 286 aaPredicted RBP19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 CRTC1Q6UUV9 634 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 NPNTQ6UXI9 565 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 Q6ZVL8 140 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 EFL1Q7Z2Z2 1120 aaKnown RBP19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 GAS2L3Q86XJ1 694 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 CCDC13Q8IYE1 715 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 FSTL5Q8N475 847 aaPredicted RBP19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 TPCN2Q8NHX9 752 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 PTCD2Q8WV60 388 aaKnown RBP19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 NUS1Q96E22 293 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 TEX101Q9BY14 249 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 GOLPH3Q9H4A6 298 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 KLQ9UEF7 1012 aa19.83■□□□□ 0.77
PDZRN3-202ENST00000308537 IGSF10Q6WRI0 2623 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 A0A1W2PNU3 283 aaPredicted RBP19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 KCNK1O00180 336 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 TNFRSF10CO14798 259 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 MX2P20592 715 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 COMTP21964 271 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 HTR1BP28222 390 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 DUSP3P51452 185 aaPredicted RBP19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 PTSQ03393 145 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 LVRNQ6Q4G3 990 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 MFSD7Q6UXD7 560 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 SFTPA2Q8IWL1 248 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 OR56A4Q8NGH8 313 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 RABGEF1Q9UJ41 708 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 ST14Q9Y5Y6 855 aa19.82■□□□□ 0.76
PDZRN3-202ENST00000308537 ZFC3H1O60293 1989 aaKnown RBP19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 TLX3O43711 291 aaPredicted RBP19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 ANXA6P08133 673 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 CYP2A6P11509 494 aaPredicted RBP19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 TEAD1P28347 426 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 SLC1A1P43005 524 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 ZNF75DP51815 510 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 PDX1P52945 283 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 SKOR1P84550 965 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 DPTQ07507 201 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 ADCY2Q08462 1091 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 NR0B2Q15466 257 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 TCEA2Q15560 299 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 LRRC66Q68CR7 880 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 RD3Q7Z3Z2 195 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 SDR16C5Q8N3Y7 309 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 KYQ8NBH2 561 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 RNF25Q96BH1 459 aaPredicted RBP19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 TADA1Q96BN2 335 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 NXPE2Q96DL1 559 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 LYSMD1Q96S90 227 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 FRMD8Q9BZ67 464 aaPredicted RBP19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 WDR26Q9H7D7 661 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 NCKIPSDQ9NZQ3 722 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 CHKBQ9Y259 395 aa19.81■□□□□ 0.76
PDZRN3-202ENST00000308537 CPED1A4D0V7 1026 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 RCCD1A6NED2 376 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 CACNB4O00305 520 aaPredicted RBP19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 JCHAINP01591 159 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 KRT1P04264 644 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 CEACAM5P06731 702 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 MYCLP1P12525 358 aaPredicted RBP19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 CES1P23141 567 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 CDKN2BP42772 138 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 MAGEA1P43355 309 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 MARCKSL1P49006 195 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 STC1P52823 247 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 ITKQ08881 620 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 ELOCQ15369 112 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 DENND2CQ68D51 928 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 OGFOD3Q6PK18 319 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 USP45Q70EL2 814 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 HEATR4Q86WZ0 1026 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 RHOT1Q8IXI2 618 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 GPR156Q8NFN8 814 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 CCL4L1Q8NHW4 92 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 MRFAP1L1Q96HT8 127 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 TRIB3Q96RU7 358 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 WDR24Q96S15 920 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 TMEM168Q9H0V1 697 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 ABCG8Q9H221 673 aa19.8■□□□□ 0.76
PDZRN3-202ENST00000308537 ALG6Q9Y672 507 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms