RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 ZNF821O75541 412 aaPredicted RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 LRG1P02750 347 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 CD1EP15812 388 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 SUOXP51687 545 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 PRKAA2P54646 552 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 DNAJB13P59910 316 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 KDSRQ06136 332 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 ACAP2Q15057 778 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 AGAP9Q5VTM2 703 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 FAM45BPQ6NSW5 357 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 TRIM67Q6ZTA4 783 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 RPS27LQ71UM5 84 aaKnown RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 MFN1Q8IWA4 741 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 SUGP1Q8IWZ8 645 aaKnown RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 PIANPQ8IYJ0 282 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 PHTF2Q8N3S3 785 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 TTC30BQ8N4P2 665 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 DCAF4L2Q8NA75 395 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 GABPB2Q8TAK5 448 aaPredicted RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 TTC8Q8TAM2 541 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 FAM45AQ8TCE6 357 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 AGAP11Q8TF27 550 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 DDI1Q8WTU0 396 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 PDCD6IPQ8WUM4 868 aaKnown RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 PTERQ96BW5 349 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 FAM136AQ96C01 138 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 TSPAN17Q96FV3 270 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 TCF25Q9BQ70 676 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 POMKQ9H5K3 350 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 DENND2DQ9H6A0 471 aaPredicted RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 WDR55Q9H6Y2 383 aaPredicted RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 TNFRSF12AQ9NP84 129 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 POLR3BQ9NW08 1133 aaPredicted RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 TAGLN3Q9UI15 199 aa6.55□□□□□ -1.36
USP47-201ENST00000305481 INTS6Q9UL03 887 aaKnown RBP6.55□□□□□ -1.36
USP47-201ENST00000305481 A8MT66 165 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 B2RBV5 119 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 LEFTY2O00292 366 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 ZBTB14O43829 449 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 FGBP02675 491 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 SLC4A1P02730 911 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 MYL4P12829 197 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 OGNP20774 298 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 ATP5F1P24539 256 aaPredicted RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 CDC25CP30307 473 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CD70P32970 193 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 RPL14P50914 215 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 PEX6Q13608 980 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 FAM219BQ5XKK7 198 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TPGS1Q6ZTW0 290 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CPXM2Q8N436 756 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TEX9Q8N6V9 391 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CCNYL1Q8N7R7 359 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 KDM1BQ8NB78 822 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 RBM15BQ8NDT2 890 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 OR6K2Q8NGY2 324 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 MAGEC3Q8TD91 643 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 SREK1Q8WXA9 508 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 LPGAT1Q92604 370 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 BADQ92934 168 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 LMLNQ96KR4 655 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CORO1BQ9BR76 489 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TM6SF2Q9BZW4 377 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CYP4F12Q9HCS2 524 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 BPIFA1Q9NP55 256 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 GALPQ9UBC7 116 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 FKBPLQ9UIM3 349 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 SORCS3Q9UPU3 1222 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 L3MBTL1Q9Y468 752 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 INSL6Q9Y581 213 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 IRAK3Q9Y616 596 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PDE4DIPQ5VU43 2346 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 C2orf81A6NN90 581 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TMEM233B4DJY2 109 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 H3BMM5 538 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 MOSPD3O75425 235 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 ADH1AP07327 375 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CD1DP15813 335 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 GKP32189 559 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 SLC26A3P40879 764 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 RHOAP61586 193 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 LMAN2Q12907 356 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PSAPL1Q6NUJ1 521 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 CAMK1DQ8IU85 385 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 EFHBQ8N7U6 833 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 MRPL43Q8N983 215 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 SP7Q8TDD2 431 aaPredicted RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 TCEAL4Q96EI5 215 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PPP1R36Q96LQ0 422 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 BIRC8Q96P09 236 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 AARSD1Q9BTE6 412 aaKnown RBP6.54□□□□□ -1.36
USP47-201ENST00000305481 ADGRE3Q9BY15 652 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 FAM96AQ9H5X1 160 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 ALG9Q9H6U8 611 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 STK39Q9UEW8 545 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PLA2G4CQ9UP65 541 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 SSX2IPQ9Y2D8 614 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 PCDHB9Q9Y5E1 797 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 MYO7AQ13402 2215 aa6.54□□□□□ -1.36
USP47-201ENST00000305481 TRAV19A0A0A6YYK7 116 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms