RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 VPS28Q9UK41 221 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 INTS6Q9UL03 887 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 VWA7Q9Y334 891 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 KCTD3Q9Y597 815 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 ATP6V1G2O95670 118 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 ZNF140P52738 457 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 ALDH18A1P54886 795 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 RBM20Q5T481 1227 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 HECTD2Q5U5R9 776 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 TTC16Q8NEE8 873 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 ISG20Q96AZ6 181 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 PTCD3Q96EY7 689 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 ZSWIM3Q96MP5 696 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 EBF4Q9BQW3 602 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 C2orf49Q9BVC5 232 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 GATA5Q9BWX5 397 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 TBC1D10AQ9BXI6 508 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 ILKAPQ9H0C8 392 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 GPAMQ9HCL2 828 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 TBC1D14Q9P2M4 693 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CORO1CQ9ULV4 474 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 C2orf81A6NN90 581 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CCL22O00626 93 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CD3EAPO15446 510 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 PRAMEF12O95522 483 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 S1PR4O95977 384 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 GOT2P00505 430 aaKnown RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 PIRTP0C851 137 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 PMLP29590 882 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 GRIA4P48058 902 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 PGGT1BP53609 377 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 AP1S1P61966 158 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CSHL1Q14406 222 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 PLEKHG6Q3KR16 790 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 ZNF789Q5FWF6 425 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 FAM45BPQ6NSW5 357 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 ELMSAN1Q6PJG2 1045 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 NAPRTQ6XQN6 538 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 TMEM184AQ6ZMB5 413 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 DENND4AQ7Z401 1863 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 GLT6D1Q7Z4J2 308 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 TMEM151AQ8N4L1 468 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 VN1R2Q8NFZ6 395 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 OR4L1Q8NH43 312 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 FAM45AQ8TCE6 357 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 DDI1Q8WTU0 396 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 GPR78Q96P69 363 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CDCA3Q99618 268 aaPredicted RBP9.16□□□□□ -0.94
PDPN-201ENST00000294489 BTBD10Q9BSF8 475 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 DRC3Q9H069 523 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CDH19Q9H159 772 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CATSPERZQ9NTU4 200 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 FBXO10Q9UK96 956 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 RAI2Q9Y5P3 530 aa9.16□□□□□ -0.94
PDPN-201ENST00000294489 CCDC162PA2VCL2 907 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 OR51F1A6NGY5 319 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 SCAMP3O14828 347 aaKnown RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 GYG2O15488 501 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 BUD23O43709 281 aaKnown RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 WISP3O95389 354 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 RBP1P09455 135 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 LTA4HP09960 611 aaKnown RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 ALOX15P16050 662 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 CEBPBP17676 345 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 OGNP20774 298 aaKnown RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 CD70P32970 193 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 HK2P52789 917 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 NAGLUP54802 743 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 NTHL1P78549 312 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 DMC1Q14565 340 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 TAF1AQ15573 450 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 GRASPQ7Z6J2 395 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 LONP2Q86WA8 852 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 SPATA6LQ8N4H0 392 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 ZNF781Q8N8C0 355 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 ZNF557Q8N988 423 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 OR13C4Q8NGS5 318 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 HEXDCQ8WVB3 486 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 PRR11Q96HE9 360 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 OLFM1Q99784 485 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 SUDS3Q9H7L9 328 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 NLE1Q9NVX2 485 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 MARCH4Q9P2E8 410 aaPredicted RBP9.15□□□□□ -0.94
PDPN-201ENST00000294489 HS3ST2Q9Y278 367 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 RAP2CQ9Y3L5 183 aa9.15□□□□□ -0.94
PDPN-201ENST00000294489 TARM1B6A8C7 271 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.95
PDPN-201ENST00000294489 DIAPH2O60879 1101 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 SNUPNO95149 360 aaKnown RBP9.15□□□□□ -0.95
PDPN-201ENST00000294489 SBK3P0C264 359 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 CCDC166P0CW27 439 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 ARRB2P32121 409 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 PBX2P40425 430 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 SLC26A3P40879 764 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 RPL26P61254 145 aaKnown RBP9.15□□□□□ -0.95
PDPN-201ENST00000294489 TRAF2Q12933 501 aa9.15□□□□□ -0.95
PDPN-201ENST00000294489 DLG1Q12959 904 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms