RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MICAL2O94851 1124 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 LTA4HP09960 611 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 CHKAP35790 457 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 IFNGR2P38484 337 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 GABRB2P47870 512 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 KPNA1P52294 538 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 STX4Q12846 297 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 DPYSQ14117 519 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 DENND5AQ6IQ26 1287 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 POLNQ7Z5Q5 900 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 TMEM139Q8IV31 216 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 LINC01599Q8WXQ3 324 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SHC3Q92529 594 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 MYDGFQ969H8 173 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC7A5P2Q9GIP4 190 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 LNPEPQ9UIQ6 1025 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 DOCK5Q9H7D0 1870 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 DHRS12A0PJE2 317 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 H3BNC9 293 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 IL12AP29459 219 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 GSSP48637 474 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 MAMLD1Q13495 774 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 PSMD5Q16401 504 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 INTS11Q5TA45 600 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 MZT2AQ6P582 158 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 PSTKQ8IV42 348 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC9A9Q8IVB4 645 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 C10orf53Q8N6V4 93 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 SMAD5Q99717 465 aaKnown RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 TBL1YQ9BQ87 522 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 TMEM109Q9BVC6 243 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 ACE2Q9BYF1 805 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 FBXO6Q9NRD1 293 aaPredicted RBP11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 TRPC4Q9UBN4 977 aa11.87□□□□□ -0.51
SYNGAP1-201ENST00000293748 TRAFD1O14545 582 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 XYLBO75191 536 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 KCNH1O95259 989 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 GLUD1P00367 558 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 LRG1P02750 347 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RHOCP08134 193 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 ERVK-10P10266 1014 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 CDC42P60953 191 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RHOAP61586 193 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 USP46P62068 366 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 PPP3CAQ08209 521 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 ZCCHC8Q6NZY4 707 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 CACTIN-AS1Q8N1I8 211 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 FBXO30Q8TB52 745 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 HASPINQ8TF76 798 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 MRPL38Q96DV4 380 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 TPD52L3Q96J77 140 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 CELF6Q96J87 481 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 HGH1Q9BTY7 390 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RNF39Q9H2S5 420 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 EPB41L1Q9H4G0 881 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 NUDT5Q9UKK9 219 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 MAPRE3Q9UPY8 281 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 YBX2Q9Y2T7 364 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 CYP2A7P20853 494 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 GRK3P35626 688 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 ATP12AP54707 1039 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 SLC39A11Q8N1S5 342 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 DEPDC4Q8N2C3 294 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 PSMA8Q8TAA3 256 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 STAG3L4Q8TBR4 150 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RCN3Q96D15 328 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 EBNA1BP2Q99848 306 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RAPGEFL1Q9UHV5 662 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RPS6KA6Q9UK32 745 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 GMPPBQ9Y5P6 360 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 MAGEC1O60732 1142 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RAMP2O60895 175 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 TM7SF2O76062 418 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 SOD2P04179 222 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 S100A9P06702 114 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 MYOGP15173 224 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 IDH2P48735 452 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 PCID2Q5JVF3 399 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 SPESP1Q6UW49 350 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 TMEM86AQ8N2M4 240 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 KCNN1Q92952 543 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 MYLPFQ96A32 169 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 S100A14Q9HCY8 104 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 PIH1D1Q9NWS0 290 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 R3HDM2Q9Y2K5 976 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RBAK-RBAKDNI3L0D1 243 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 EPN2O95208 641 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 SP100P23497 879 aaPredicted RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 UBAP2LQ14157 1087 aaKnown RBP11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 QPRTQ15274 297 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 FGD3Q5JSP0 725 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 OVOS1Q6IE37 1185 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 GSTCDQ8NEC7 633 aa11.86□□□□□ -0.51
SYNGAP1-201ENST00000293748 RTKNQ9BST9 563 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms