RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 POLD2P49005 469 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 SRP54P61011 504 aaKnown RBP5.71□□□□□ -1.49
VCAN-201ENST00000265077 S100A12P80511 92 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 PHKG1Q16816 387 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 CCNYL2Q5T2Q4 361 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 LIPMQ5VYY2 423 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 CYP2R1Q6VVX0 501 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 ZNF276Q8N554 614 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 SPATA13Q96N96 652 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 APBA2Q99767 749 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 ROGDIQ9GZN7 287 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 CDH9Q9ULB4 789 aa5.71□□□□□ -1.49
VCAN-201ENST00000265077 MTF2Q9Y483 593 aaPredicted RBP5.71□□□□□ -1.49
VCAN-201ENST00000265077 FAM237BA0A1B0GVD1 139 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 IRGMA1A4Y4 181 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 MICAL2O94851 1124 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 RPL3P39023 403 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 TNK2Q07912 1038 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 AFTPHQ6ULP2 937 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 DDX53Q86TM3 631 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 ALYREFQ86V81 257 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 FBXO32Q969P5 355 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 GSTK1Q9Y2Q3 226 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 PRSS44E7EML9 344 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 GMDSO60547 372 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 PLEKHG7Q6ZR37 379 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 DEPDC4Q8N2C3 294 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SLC9A6Q92581 669 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 MAELQ96JY0 434 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 ZNF347Q96SE7 839 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 POP1Q99575 1024 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 DPY30Q9C005 99 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ABT1Q9ULW3 272 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 HDAC3O15379 428 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SGTAO43765 313 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 PAHP00439 452 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SERPIND1P05546 499 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 STAG3L1P0CL83 205 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 POU1F1P28069 291 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 PRDX6P30041 224 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 MIPP30301 263 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 CCR1P32246 355 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 BTBD16Q32M84 506 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ACOT1Q86TX2 421 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SLC15A3Q8IY34 581 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 RTKNQ9BST9 563 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ADI1Q9BV57 179 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 CPNE5Q9HCH3 593 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ABI2Q9NYB9 513 aaPredicted RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 POLR2AP24928 1970 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 ZNF701M0R085 212 aaPredicted RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 CYB561D2O14569 222 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ALDH1A2O94788 518 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 TSPAN19P0C672 248 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SMIM11AP58511 58 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 INSCQ1MX18 579 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ZPBP2Q6X784 338 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ZNF605Q86T29 641 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 FAM83AQ86UY5 434 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 B3GALNT2Q8NCR0 500 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ERGIC3Q9Y282 383 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 DHRS12A0PJE2 317 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 NPM3O75607 178 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 KCNA5P22460 613 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 MGAT1P26572 445 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 GPSM1Q86YR5 675 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 EPHX4Q8IUS5 362 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 RDH11Q8TC12 318 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 NMRK2Q9NPI5 230 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ARHGAP23Q9P227 1491 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SETD1AO15047 1707 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 DHFRP00374 187 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SLC2A4P14672 509 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 GMFBP60983 142 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 RPS7P62081 194 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 DUPD1Q68J44 220 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 KCNT2Q6UVM3 1135 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 METTL7BQ6UX53 244 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ZNF410Q86VK4 478 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 CACTIN-AS1Q8N1I8 211 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 PRELID2Q8N945 189 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 METTL6Q8TCB7 284 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 BAP1Q92560 729 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 TCEAL7Q9BRU2 100 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 ZNF696Q9H7X3 374 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 GPRC5CQ9NQ84 441 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 MIEF1Q9NQG6 463 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 SH3BP4Q9P0V3 963 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 KCNN3Q9UGI6 736 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 LEF1Q9UJU2 399 aaPredicted RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 INVSQ9Y283 1065 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 STXBP5LQ9Y2K9 1186 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 LTA4HP09960 611 aaKnown RBP5.71□□□□□ -1.5
VCAN-201ENST00000265077 NR4A2P43354 598 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 PCBP1Q15365 356 aaKnown RBP eCLIP5.71□□□□□ -1.5
VCAN-201ENST00000265077 NDUFAF6Q330K2 333 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 CLIP4Q8N3C7 705 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 MARVELD2Q8N4S9 558 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 RNF148Q8N7C7 305 aa5.71□□□□□ -1.5
VCAN-201ENST00000265077 RNF145Q96MT1 663 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms