RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 C6orf10Q5SRN2 563 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 DEPDC1Q5TB30 811 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 LIPMQ5VYY2 423 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 NPNTQ6UXI9 565 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 LPCAT2Q7L5N7 544 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 RBFAQ8N0V3 343 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 TDRD5Q8NAT2 981 aaKnown RBP8.25□□□□□ -1.09
PTPN3-201ENST00000262539 TADA1Q96BN2 335 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 PPP1R16AQ96I34 528 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 ATXN3LQ9H3M9 355 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 PKD2L2Q9NZM6 624 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 GPN3Q9UHW5 284 aaPredicted RBP8.25□□□□□ -1.09
PTPN3-201ENST00000262539 TDRKHQ9Y2W6 561 aaKnown RBP8.25□□□□□ -1.09
PTPN3-201ENST00000262539 CDK5RAP2Q96SN8 1893 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 IFRD1O00458 451 aaPredicted RBP8.25□□□□□ -1.09
PTPN3-201ENST00000262539 NUDT14O95848 222 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 RPSAP08865 295 aaKnown RBP8.25□□□□□ -1.09
PTPN3-201ENST00000262539 ZNF30P17039 623 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 XIAPP98170 497 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 DUSP4Q13115 394 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 RAP1GAP2Q684P5 730 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 AAGABQ6PD74 315 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 SLC39A5Q6ZMH5 540 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 UNC5BQ8IZJ1 945 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 MDM1Q8TC05 714 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 DTX3LQ8TDB6 740 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 DIS3LQ8TF46 1054 aaKnown RBP8.25□□□□□ -1.09
PTPN3-201ENST00000262539 CNDP1Q96KN2 507 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 RAD9AQ99638 391 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 HERPUD2Q9BSE4 406 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 R3HDMLQ9H3Y0 253 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 GID8Q9NWU2 228 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 SOHLH2Q9NX45 425 aa8.25□□□□□ -1.09
PTPN3-201ENST00000262539 PRPF19Q9UMS4 504 aaKnown RBP8.25□□□□□ -1.09
PTPN3-201ENST00000262539 MAGEC1O60732 1142 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 CLASP2O75122 1294 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SCTRP47872 440 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 WDR4P57081 412 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 HIC1Q14526 733 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 TAF1AQ15573 450 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 DOK6Q6PKX4 331 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 LUZP2Q86TE4 346 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 CELF6Q96J87 481 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 TCF7L2Q9NQB0 619 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 C8orf4Q9NR00 106 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SNX15Q9NRS6 342 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 IARS2Q9NSE4 1012 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KLC4Q9NSK0 619 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 DNAJC28Q9NX36 388 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 CDYLQ9Y232 598 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 ZNF840PA6NDX5 716 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 HHLA1C9JL84 531 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SCNN1BP51168 640 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 ELP6Q0PNE2 266 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KIAA1324Q6UXG2 1013 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SCD5Q86SK9 330 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 RNF168Q8IYW5 571 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 CASP10Q92851 521 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 OXNAD1Q96HP4 312 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 MUC13Q9H3R2 512 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 TFB2MQ9H5Q4 396 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 F8W810 466 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 HSPA13P48723 471 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 VEGFBP49765 207 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 NEK3P51956 506 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 ACAP2Q15057 778 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 CCDC142Q17RM4 750 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 AADATQ8N5Z0 425 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 ZNF555Q8NEP9 628 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 GPR150Q8NGU9 434 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SAE1Q9UBE0 346 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 BBIP1A8MTZ0 92 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 PFDN1O60925 122 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 RASSF9O75901 435 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KRT6AP02538 564 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KRT6BP04259 564 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 PKMP14618 531 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 GRIA4P48058 902 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KRT6CP48668 564 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 CLCN2P51788 898 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 RPS7P62081 194 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 TGM3Q08188 693 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 TCEA2Q15560 299 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 DDR2Q16832 855 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KREMEN2Q8NCW0 462 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KCNJ9Q92806 393 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 PKMYT1Q99640 499 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SH3GL1Q99961 368 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 CEP44Q9C0F1 390 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 POLG2Q9UHN1 485 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 LNPEPQ9UIQ6 1025 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KDELR3O43731 214 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 KATNA1O75449 491 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 ABLIM3O94929 683 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 POP4O95707 220 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 NQO1P15559 274 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 LEPRP48357 1165 aaKnown RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 IL2P60568 153 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SLC7A9P82251 487 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 ZBTB17Q13105 803 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms