RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 CHFRQ96EP1 664 aa16.76■□□□□ 0.27
HLA-F-216ENST00000259951 MCCC1Q96RQ3 725 aaPredicted RBP16.76■□□□□ 0.27
HLA-F-216ENST00000259951 C8orf33Q9H7E9 229 aaPredicted RBP16.76■□□□□ 0.27
HLA-F-216ENST00000259951 CATSPERZQ9NTU4 200 aa16.76■□□□□ 0.27
HLA-F-216ENST00000259951 POLR3BQ9NW08 1133 aaPredicted RBP16.76■□□□□ 0.27
HLA-F-216ENST00000259951 IL17CQ9P0M4 197 aa16.76■□□□□ 0.27
HLA-F-216ENST00000259951 HMX2A2RU54 273 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 PFDN6O15212 129 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 CD3EAPO15446 510 aaKnown RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 CYP2A6P11509 494 aaPredicted RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 HNRNPLP14866 589 aaKnown RBP eCLIP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 OGNP20774 298 aaKnown RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 XPAP23025 273 aaPredicted RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 MDH1P40925 334 aaKnown RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 CD151P48509 253 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 SERPINB8P50452 374 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 GALK1P51570 392 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 SLC18A2Q05940 514 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 CTBP1Q13363 440 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 FASTKD1Q53R41 847 aaKnown RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 C9orf64Q5T6V5 341 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 NAIF1Q69YI7 327 aaPredicted RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 ZC3HC1Q86WB0 502 aaKnown RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 RALGPS2Q86X27 583 aaPredicted RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 CILP2Q8IUL8 1156 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 DENND6AQ8IWF6 608 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 VPS39Q96JC1 886 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 SERAC1Q96JX3 654 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 CABS1Q96KC9 395 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 MCMBPQ9BTE3 642 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 CAPS2Q9BXY5 557 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 KCNK12Q9HB15 430 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 LIMD1Q9UGP4 676 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 FAM50BQ9Y247 325 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
HLA-F-216ENST00000259951 SCN8AQ9UQD0 1980 aa16.75■□□□□ 0.27
HLA-F-216ENST00000259951 SPTBN5Q9NRC6 3674 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 RFPL1O75677 317 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 ZWINTO95229 277 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 AHSGP02765 367 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PYGBP11216 843 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CREB1P16220 341 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 LEPRP48357 1165 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PTPN5P54829 565 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PTPRCAPQ14761 206 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SEPT7Q16181 437 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 FSTL4Q6MZW2 842 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 ZSWIM9Q86XI8 627 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SLC44A3Q8N4M1 653 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 ZNF366Q8N895 744 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 BANPQ8N9N5 519 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 APOPT1Q96IL0 206 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SMIM14Q96QK8 99 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 TCF12Q99081 682 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 GPR22Q99680 433 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SUDS3Q9H7L9 328 aaPredicted RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 INTS9Q9NV88 658 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 VPS9D1Q9Y2B5 631 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 ZNF106Q9H2Y7 1883 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 COL4A2P08572 1712 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 UPK3BL1B0FP48 263 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SPECC1L-ADORA2AF8WAN1 911 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 GOLGA8RI6L899 631 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CCL22O00626 93 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 COPEO14579 308 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 TYROBPO43914 113 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SPAG7O75391 227 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CTSLP07711 333 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 HLA-EP13747 358 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CHN1P15882 459 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 ZNF30P17039 623 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PMLP29590 882 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 TYK2P29597 1187 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CTHP32929 405 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CCNFP41002 786 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SOX9P48436 509 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CLCN5P51795 746 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 MPP1Q00013 466 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PFKPQ01813 784 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 SMAD2Q15796 467 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PUS10Q3MIT2 529 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 AARS2Q5JTZ9 985 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 ZDHHC20Q5W0Z9 365 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 STK40Q8N2I9 435 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 CBARPQ8N350 705 aaPredicted RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 DCLK2Q8N568 766 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 MAFAQ8NHW3 353 aaPredicted RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 KCNV2Q8TDN2 545 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 ISL2Q96A47 359 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 PPP1R16AQ96I34 528 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 IQCGQ9H095 443 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 MTG2Q9H4K7 406 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 INTS10Q9NVR2 710 aaKnown RBP16.74■□□□□ 0.27
HLA-F-216ENST00000259951 MKS1Q9NXB0 559 aa16.74■□□□□ 0.27
HLA-F-216ENST00000259951 APPL1Q9UKG1 709 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms