RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ADH5P11766 374 aa18.92■□□□□ 0.62
TRIM47-201ENST00000254816 LEPRP48357 1165 aaKnown RBP18.92■□□□□ 0.62
TRIM47-201ENST00000254816 STK38LQ9Y2H1 464 aa18.92■□□□□ 0.62
TRIM47-201ENST00000254816 SCN8AQ9UQD0 1980 aa18.92■□□□□ 0.62
TRIM47-201ENST00000254816 A8MUI8 341 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 HEPACAM2A8MVW5 462 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 CHUKO15111 745 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 DNAJC6O75061 913 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 SNRPD1P62314 119 aaKnown RBP18.91■□□□□ 0.62
TRIM47-201ENST00000254816 METTL3Q86U44 580 aaKnown RBP18.91■□□□□ 0.62
TRIM47-201ENST00000254816 ZSWIM9Q86XI8 627 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 OR4L1Q8NH43 312 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 PEX13Q92968 403 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 CRYL1Q9Y2S2 319 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-201ENST00000254816 OTOL1A6NHN0 477 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-201ENST00000254816 PLIN3O60664 434 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 S1PR4O95977 384 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 LPOP22079 712 aaPredicted RBP18.91■□□□□ 0.62
TRIM47-201ENST00000254816 CSNK1DP48730 415 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 CSRP3P50461 194 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 CCDC15Q0P6D6 951 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 SETDB1Q15047 1291 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 KYAT3Q6YP21 454 aaKnown RBP18.91■□□□□ 0.62
TRIM47-201ENST00000254816 KIAA0408Q6ZU52 694 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 Q6ZVU0 165 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 TTC30BQ8N4P2 665 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 PPP2R3CQ969Q6 453 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 ATP13A3Q9H7F0 1226 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 CATSPERZQ9NTU4 200 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 FKBPLQ9UIM3 349 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 RIMKLBQ9ULI2 386 aa18.91■□□□□ 0.62
TRIM47-201ENST00000254816 A8MX80 341 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 GSRP00390 522 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 SLC35E2BP0CK96 405 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 POLR2EP19388 210 aaKnown RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 GRIA4P48058 902 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 GTF2A1P52655 376 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 TAS2R39P59534 338 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 SEMG2Q02383 582 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 MESP2Q0VG99 397 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 MYLK3Q32MK0 819 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 CES4AQ5XG92 561 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 ANKRD54Q6NXT1 300 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 DPY19L3Q6ZPD9 716 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 ASRGL1Q7L266 308 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 LYSMD3Q7Z3D4 306 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 KIAA0907Q7Z7F0 614 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 AHI1Q8N157 1196 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 EID2BQ96D98 161 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 LRRC37BQ96QE4 947 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 OLFM1Q99784 485 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 OMDQ99983 421 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 UNKQ9C0B0 810 aaKnown RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 NSUN3Q9H649 340 aaKnown RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 ZDHHC6Q9H6R6 413 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 DCTN4Q9UJW0 460 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 ERVW-1Q9UQF0 538 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 ZNF711Q9Y462 761 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 HTRA2O43464 458 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 PROCP04070 461 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 BPGMP07738 259 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 TARSP26639 723 aaKnown RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 HADHAP40939 763 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 DGKGP49619 791 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 CDKN1CP49918 316 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 CCNHP51946 323 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 TANGO2Q6ICL3 276 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 CLEC14AQ86T13 490 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 NUDCD3Q8IVD9 361 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 TNS4Q8IZW8 715 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 SPATA6LQ8N4H0 392 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 CHST14Q8NCH0 376 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 RFWD2Q8NHY2 731 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 GABPB2Q8TAK5 448 aaPredicted RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 CIPCQ9C0C6 399 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 FAM96AQ9H5X1 160 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 ARHGEF3Q9NR81 526 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 TLK1Q9UKI8 766 aa18.9■□□□□ 0.62
TRIM47-201ENST00000254816 SPTBN5Q9NRC6 3674 aaKnown RBP18.9■□□□□ 0.62
TRIM47-201ENST00000254816 CISD3P0C7P0 127 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 STMN1P16949 149 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 KCNA4P22459 653 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 FCARP24071 287 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 SLC6A11P48066 632 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 RAB10P61026 200 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 SULT2A1Q06520 285 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 DMC1Q14565 340 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 CHI3L2Q15782 390 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 INSCQ1MX18 579 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 CARD16Q5EG05 197 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 ZCCHC23Q6ZST2 131 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 TDHQ8IZJ6 230 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.89■□□□□ 0.61
TRIM47-201ENST00000254816 ZNF557Q8N988 423 aaPredicted RBP18.89■□□□□ 0.61
TRIM47-201ENST00000254816 TTC8Q8TAM2 541 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 ISG20Q96AZ6 181 aaKnown RBP18.89■□□□□ 0.61
TRIM47-201ENST00000254816 TMEM237Q96Q45 408 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 SLC2A11Q9BYW1 496 aa18.89■□□□□ 0.61
TRIM47-201ENST00000254816 GPR63Q9BZJ6 419 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms