RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 VEGFBP49765 207 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 RBM20Q5T481 1227 aaKnown RBP22.25■■□□□ 1.15
CCDC9-201ENST00000221922 AP1ARQ63HQ0 302 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 SLC8B1Q6J4K2 584 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 CILP2Q8IUL8 1156 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 LILRA2Q8N149 483 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 FBXO22Q8NEZ5 403 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 CEP70Q8NHQ1 597 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 PEX13Q92968 403 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 SCLYQ96I15 445 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 MARK4Q96L34 752 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 CCSER2Q9H7U1 834 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 MTRRQ9UBK8 725 aa22.25■■□□□ 1.15
CCDC9-201ENST00000221922 TMEM233B4DJY2 109 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 AURKAO14965 403 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 RBP1P09455 135 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 LTA4HP09960 611 aaKnown RBP22.24■■□□□ 1.15
CCDC9-201ENST00000221922 PRAMEP78395 509 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 DYNC1I2Q13409 638 aaKnown RBP22.24■■□□□ 1.15
CCDC9-201ENST00000221922 BTG3Q14201 252 aaPredicted RBP22.24■■□□□ 1.15
CCDC9-201ENST00000221922 CSHL1Q14406 222 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 TECRLQ5HYJ1 363 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 TRIM67Q6ZTA4 783 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 CHSY3Q70JA7 882 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 SPATA6LQ8N4H0 392 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 GIPC2Q8TF65 315 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 USP13Q92995 863 aaPredicted RBP22.24■■□□□ 1.15
CCDC9-201ENST00000221922 POMKQ9H5K3 350 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 TRIM17Q9Y577 477 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 MICAL3Q7RTP6 2002 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 PRAMEF11O60813 436 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 HLA-DPA1P20036 260 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 MSX2P35548 267 aaPredicted RBP22.24■■□□□ 1.15
CCDC9-201ENST00000221922 PSMD8P48556 350 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 ZNF235Q14590 738 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 PGBD5Q8N414 524 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 NAT14Q8WUY8 206 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 FEM1CQ96JP0 617 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 ZNF599Q96NL3 588 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 NDNQ99608 321 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 OLFM1Q99784 485 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 HIPK3Q9H422 1215 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 RETREG1Q9H6L5 497 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 MRGBPQ9NV56 204 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 UBAP1Q9NZ09 502 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 BACE2Q9Y5Z0 518 aa22.24■■□□□ 1.15
CCDC9-201ENST00000221922 CHD5Q8TDI0 1954 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 STX16-NPEPL1H3BU86 382 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 CRTAMO95727 393 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 FGF1P05230 155 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 ATXN1LP0C7T5 689 aaKnown RBP22.23■■□□□ 1.15
CCDC9-201ENST00000221922 TACR2P21452 398 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 SLC26A3P40879 764 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 PFKPQ01813 784 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 HECTD2Q5U5R9 776 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 NADSYN1Q6IA69 706 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 AFAP1L2Q8N4X5 818 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 OR6P1Q8NGX9 317 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 FAR2Q96K12 515 aa22.23■■□□□ 1.15
CCDC9-201ENST00000221922 COPS7BQ9H9Q2 264 aaPredicted RBP22.23■■□□□ 1.15
CCDC9-201ENST00000221922 F5H5T6 163 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 EPOP01588 193 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 PMLP29590 882 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 ETFBP38117 255 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 USP41Q3LFD5 358 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 C5orf22Q49AR2 442 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 ZNF789Q5FWF6 425 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 PTAR1Q7Z6K3 402 aaPredicted RBP22.22■■□□□ 1.15
CCDC9-201ENST00000221922 CIR1Q86X95 450 aaPredicted RBP22.22■■□□□ 1.15
CCDC9-201ENST00000221922 OVCA2Q8WZ82 227 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 HDAC10Q969S8 669 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 NPAS2Q99743 824 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 SEMA3CQ99985 751 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 VCX3AQ9NNX9 186 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 SAGE1Q9NXZ1 904 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 OGDHLQ9ULD0 1010 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 VWA7Q9Y334 891 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 ADAM12O43184 909 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 TUFMP49411 452 aaKnown RBP22.22■■□□□ 1.15
CCDC9-201ENST00000221922 ALDH7A1P49419 539 aaKnown RBP22.22■■□□□ 1.15
CCDC9-201ENST00000221922 SULT2A1Q06520 285 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 IHHQ14623 411 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 ACAP2Q15057 778 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 ANKRD33Q7Z3H0 272 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 SATL1Q86VE3 508 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 RNF168Q8IYW5 571 aaPredicted RBP22.22■■□□□ 1.15
CCDC9-201ENST00000221922 BBS5Q8N3I7 341 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 RNF148Q8N7C7 305 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 PDZD8Q8NEN9 1154 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 KLHL32Q96NJ5 620 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 DEFB118Q96PH6 123 aa22.22■■□□□ 1.15
CCDC9-201ENST00000221922 SUDS3Q9H7L9 328 aaPredicted RBP22.22■■□□□ 1.15
CCDC9-201ENST00000221922 EML4Q9HC35 981 aaKnown RBP22.22■■□□□ 1.15
CCDC9-201ENST00000221922 TRIM38O00635 465 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 LDB2O43679 373 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 HOXB8P17481 243 aaPredicted RBP22.21■■□□□ 1.15
CCDC9-201ENST00000221922 ACVRL1P37023 503 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 CCL23P55773 120 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 ACVR1Q04771 509 aa22.21■■□□□ 1.15
CCDC9-201ENST00000221922 LSAMPQ13449 338 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms