RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NDUFS2O75306 463 aa27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 C1SP09871 688 aa27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 PTPRCAPQ14761 206 aa27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 ACOX1Q15067 660 aa27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 HSD11B1LQ7Z5J1 315 aa27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 GSPT2Q8IYD1 628 aaKnown RBP27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 BPIFA1Q9NP55 256 aa27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 ZFR2Q9UPR6 939 aaKnown RBP27.26■■□□□ 1.95
CHMP4B-201ENST00000217402 C2orf81A6NN90 581 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 H0Y858 1186 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 LDB2O43679 373 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 SP9P0CG40 484 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 BCKDHBP21953 392 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 MAT2AP31153 395 aaKnown RBP27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 STC1P52823 247 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 PDIA2Q13087 525 aaKnown RBP27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 SRSF5Q13243 272 aaKnown RBP27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 PCID2Q5JVF3 399 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 KLK6Q92876 244 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 LRFN3Q9BTN0 628 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 FAM129AQ9BZQ8 928 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 SAMD15Q9P1V8 674 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 MTRF1LQ9UGC7 380 aaKnown RBP27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 TCAF1Q9Y4C2 921 aa27.25■■□□□ 1.95
CHMP4B-201ENST00000217402 HEATR9A2RTY3 570 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 MAP3K13O43283 966 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 GALR2O43603 387 aaPredicted RBP27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 LZTS3O60299 673 aaPredicted RBP27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 ADRA1DP25100 572 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 RPS21P63220 83 aaKnown RBP27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 RPL6Q02878 288 aaKnown RBP27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 KIAA1161Q6NSJ0 714 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 RFLNAQ6ZTI6 216 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 CENPUQ71F23 418 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 TMC3Q7Z5M5 1100 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 HORMAD1Q86X24 394 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 DEFB119Q8N690 84 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 SIGLEC10Q96LC7 697 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 RANBP9Q96S59 729 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 FMO2Q99518 471 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 TRIM56Q9BRZ2 755 aaKnown RBP27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 CHRAC1Q9NRG0 131 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 EML5Q05BV3 1969 aa27.24■■□□□ 1.95
CHMP4B-201ENST00000217402 LPOP22079 712 aaPredicted RBP27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 HMGCLP35914 325 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 ETV3P41162 512 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 NEK5Q6P3R8 708 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 ZNF778Q96MU6 729 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 FAM126AQ9BYI3 521 aaPredicted RBP27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 SAYSD1Q9NPB0 183 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 CD84Q9UIB8 345 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 FNDC3AQ9Y2H6 1198 aaKnown RBP27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 RPP40O75818 363 aaKnown RBP27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 TM7SF2O76062 418 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 FSBPO95073 299 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 GM2AP17900 193 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 ZNF140P52738 457 aaPredicted RBP27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 TMPRSS15P98073 1019 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 FASTKD3Q14CZ7 662 aaKnown RBP27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 ZNF528Q3MIS6 628 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 TMEM259Q4ZIN3 620 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 Q6ZVL8 140 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 ANKMY2Q8IV38 441 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 OR4K2Q8NGD2 314 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 OR13C4Q8NGS5 318 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 RUBCNQ92622 972 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 STAMBPL1Q96FJ0 436 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 CHMP2BQ9UQN3 213 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 PKP3Q9Y446 797 aa27.23■■□□□ 1.95
CHMP4B-201ENST00000217402 MROH6A6NGR9 719 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 PSMD11O00231 422 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 STX7O15400 261 aaKnown RBP27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 RECQL5O94762 991 aaPredicted RBP27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 MYBL2P10244 700 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 ELK3P41970 407 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 VSNL1P62760 191 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 ELF2Q15723 593 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 ZNF284Q2VY69 593 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 KIAA0895LQ68EN5 471 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 CES3Q6UWW8 571 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 SLC36A4Q6YBV0 504 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 TRIM69Q86WT6 500 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 IGDCC3Q8IVU1 814 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 ZBED8Q8IZ13 594 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 DNAJC1Q96KC8 554 aaKnown RBP27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 COQ10AQ96MF6 247 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 WDR83Q9BRX9 315 aaKnown RBP27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 FOXP3Q9BZS1 431 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 ZSCAN32Q9NX65 697 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 PKD2L2Q9NZM6 624 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 IL17CQ9P0M4 197 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 SLC2A6Q9UGQ3 507 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 SOX13Q9UN79 622 aa27.22■■□□□ 1.95
CHMP4B-201ENST00000217402 E7ESA3 106 aa27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 CCL22O00626 93 aa27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 PDE1BQ01064 536 aa27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 FGL2Q14314 439 aa27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 CBARPQ8N350 705 aaPredicted RBP27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 GPR161Q8N6U8 529 aaKnown RBP27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 GAB3Q8WWW8 586 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms