RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CYP2S1Q96SQ9 504 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 AKTIPQ9H8T0 292 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 RGS18Q9NS28 235 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 RSL24D1Q9UHA3 163 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 TLR6Q9Y2C9 796 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 PTPRDP23468 1912 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 A0A0J9YYE9 177 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 ATP6AP2A0A1C7CYW4 349 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 H3BSA7 217 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 HNRNPRO43390 633 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 ATP6AP2O75787 350 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 HSD17B1P14061 328 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 BRCC3P46736 316 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 PGFP49763 221 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 CDK9P50750 372 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 ACVR1Q04771 509 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 ITKQ08881 620 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 BNIP2Q12982 314 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 INTS11Q5TA45 600 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 PIK3R6Q5UE93 754 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 CD300LGQ6UXG3 332 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 RETREG3Q86VR2 466 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 SPATA2LQ8IUW3 424 aaPredicted RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 NUP93Q8N1F7 819 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 TEX26Q8N6G2 289 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 MFSD2AQ8NA29 543 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 CANT1Q8WVQ1 401 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 RSPH1Q8WYR4 309 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 TFAP2CQ92754 450 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.32□□□□□ -0.28
SRP54-201ENST00000216774 DNAJC1Q96KC8 554 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 TMEM209Q96SK2 561 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 CLK4Q9HAZ1 481 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 PRDM5Q9NQX1 630 aaPredicted RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 POLR3BQ9NW08 1133 aaPredicted RBP13.32□□□□□ -0.28
SRP54-201ENST00000216774 SLC8A2Q9UPR5 921 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 DNAJC15Q9Y5T4 150 aa13.32□□□□□ -0.28
SRP54-201ENST00000216774 ZNF839A8K0R7 811 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 GPR182O15218 404 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 AKAP10O43572 662 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 ZNF623O75123 536 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 TIPRLO75663 272 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 MATN4O95460 622 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 CD1DP15813 335 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 ATP6V1B2P21281 511 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 GRIK1P39086 918 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 GRIA3P42263 894 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 SUOXP51687 545 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 ARSDP51689 593 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 SH3BP2P78314 561 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 PRKCQQ04759 706 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 SLC10A7Q0GE19 358 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 INPP5AQ14642 412 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 KIF19Q2TAC6 998 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 PAN2Q504Q3 1202 aaKnown RBP13.31□□□□□ -0.28
SRP54-201ENST00000216774 COQ5Q5HYK3 327 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 SIRPB2Q5JXA9 342 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 PIM3Q86V86 326 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 CAMK1DQ8IU85 385 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 ERI1Q8IV48 349 aaKnown RBP13.31□□□□□ -0.28
SRP54-201ENST00000216774 ZNF683Q8IZ20 524 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 MIER2Q8N344 545 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 SNX31Q8N9S9 440 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 GPR150Q8NGU9 434 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 RHEBL1Q8TAI7 183 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 PTERQ96BW5 349 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 HMCESQ96FZ2 354 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 SLC39A3Q9BRY0 314 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 ZYG11BQ9C0D3 744 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 AGO3Q9H9G7 860 aaKnown RBP13.31□□□□□ -0.28
SRP54-201ENST00000216774 NMUR1Q9HB89 426 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 DDX18Q9NVP1 670 aaKnown RBP13.31□□□□□ -0.28
SRP54-201ENST00000216774 TMEM248Q9NWD8 314 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 DUS2Q9NX74 493 aaKnown RBP13.31□□□□□ -0.28
SRP54-201ENST00000216774 MARCH4Q9P2E8 410 aaPredicted RBP13.31□□□□□ -0.28
SRP54-201ENST00000216774 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 CIDEBQ9UHD4 219 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 NLRC5Q86WI3 1866 aa13.31□□□□□ -0.28
SRP54-201ENST00000216774 A0A1B0GTW7 788 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 LOC285095A0A1B0GVY8 99 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 A0A1W2PQH9 124 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 J3KR12 359 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 NR5A2O00482 541 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 LDB2O43679 373 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 CDK14O94921 469 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 BMP10O95393 424 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 MT-CO1P00395 513 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 MAXP61244 160 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 HPCAP84074 193 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 DSC2Q02487 901 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 FOXM1Q08050 763 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 KCTD21Q4G0X4 260 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 KANK2Q63ZY3 851 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 SLC39A13Q96H72 371 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 SLC45A3Q96JT2 553 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms