RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PCSK1P29120 753 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 GRIA3P42263 894 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 NDST2P52849 883 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CDH15P55291 814 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 SH3BGRP55822 239 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-233ENST00000642021 SH3BP2P78314 561 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 MAPRE2Q15555 327 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 SLC14A2Q15849 920 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 UNC50Q53HI1 259 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 ZNF678Q5SXM1 525 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 BORAQ6PGQ7 559 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 KIAA0408Q6ZU52 694 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CILP2Q8IUL8 1156 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 PPWD1Q96BP3 646 aaKnown RBP13.87□□□□□ -0.19
PHGDH-233ENST00000642021 PTERQ96BW5 349 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 SLC45A3Q96JT2 553 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 OSBPL11Q9BXB4 747 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CATSPERBQ9H7T0 1116 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 ZNF408Q9H9D4 720 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 PADI4Q9UM07 663 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CRYL1Q9Y2S2 319 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 HS3ST4Q9Y661 456 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 SCN4AP35499 1836 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 E9PAM4 449 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 H0YJX3 145 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 B3GAT3O94766 335 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 IMPDH2P12268 514 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 GPX3P22352 226 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CCR1P32246 355 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CYP2C18P33260 490 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CD86P42081 329 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CLCN2P51788 898 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 PRKCQQ04759 706 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 TMEM259Q4ZIN3 620 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 NHSL2Q5HYW2 709 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 AFMIDQ63HM1 303 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 ZBTB49Q6ZSB9 765 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 SCD5Q86SK9 330 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 LZTR1Q8N653 840 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 TRIML2Q8N7C3 387 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 OR52K2Q8NGK3 314 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 OR6P1Q8NGX9 317 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 HDAC10Q969S8 669 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 CCDC126Q96EE4 140 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 DUS3LQ96G46 650 aaKnown RBP13.87□□□□□ -0.19
PHGDH-233ENST00000642021 PRKD2Q9BZL6 878 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 AKTIPQ9H8T0 292 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 NMUR1Q9HB89 426 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 NT5MQ9NPB1 228 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 TMCO1Q9UM00 188 aa13.87□□□□□ -0.19
PHGDH-233ENST00000642021 FNDC1Q4ZHG4 1894 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-233ENST00000642021 F8W810 466 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 H3BNH8 94 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 TRMUO75648 421 aaKnown RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 TMCC1O94876 653 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 SIX3O95343 332 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 WISP3O95389 354 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 S1PR4O95977 384 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ZNF865P0CJ78 1059 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ZNF23P17027 643 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 CLCN5P51795 746 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 FOXA1P55317 472 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 SLC10A7Q0GE19 358 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 SAMD4BQ5PRF9 694 aaKnown RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 FAM45BPQ6NSW5 357 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 KLC3Q6P597 504 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 CD300LGQ6UXG3 332 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 DHFR2Q86XF0 187 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 FAM45AQ8TCE6 357 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 EXT2Q93063 718 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 PKMYT1Q99640 499 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 YIPF2Q9BWQ6 316 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 TRIM8Q9BZR9 551 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ARNT2Q9HBZ2 717 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 MRPL40Q9NQ50 206 aaKnown RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 DNAJC15Q9Y5T4 150 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ARHGAP10A1A4S6 786 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 FAM149AA5PLN7 773 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 FGF10O15520 208 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 GJB3O75712 270 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 SRP72O76094 671 aaKnown RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 POMCP01189 267 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 GNAO1P09471 354 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 RANBP1P43487 201 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 SERPINH1P50454 418 aaKnown RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ITKQ08881 620 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 GALNT1Q10472 559 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 PTPRCAPQ14761 206 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 VPS26BQ4G0F5 336 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 TFAP2DQ7Z6R9 452 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 RTL3Q8N8U3 475 aaKnown RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 C19orf60Q96EN9 201 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ACBD6Q9BR61 282 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 SLC25A51Q9H1U9 297 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ATP13A1Q9HD20 1204 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 POLR3BQ9NW08 1133 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-233ENST00000642021 DSEQ9UL01 958 aa13.86□□□□□ -0.19
PHGDH-233ENST00000642021 ZNF236Q9UL36 1845 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 PDLIM1O00151 329 aa13.85□□□□□ -0.19
PHGDH-233ENST00000642021 NME4O00746 187 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms