RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 HNF1BP35680 557 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 HK3P52790 923 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 TSR1Q2NL82 804 aaKnown RBP17.77■□□□□ 0.44
PNKP-230ENST00000638016 PERM1Q5SV97 790 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 ZCCHC8Q6NZY4 707 aaKnown RBP17.77■□□□□ 0.44
PNKP-230ENST00000638016 C19orf48Q6RUI8 117 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 B4GALNT4Q76KP1 1039 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 SFTPA2Q8IWL1 248 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 BBS5Q8N3I7 341 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 PLD5Q8N7P1 536 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 PDCD7Q8N8D1 485 aaKnown RBP17.77■□□□□ 0.44
PNKP-230ENST00000638016 TC2NQ8N9U0 490 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 RFFLQ8WZ73 363 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 OR1E3Q8WZA6 343 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 MAML1Q92585 1016 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 COQ10AQ96MF6 247 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 IL12RB2Q99665 862 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 DUSP23Q9BVJ7 150 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 SLC13A1Q9BZW2 595 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 TRIM5Q9C035 493 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 DTLQ9NZJ0 730 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 SIRPGQ9P1W8 387 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 KLQ9UEF7 1012 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 CLCA2Q9UQC9 943 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 RAI2Q9Y5P3 530 aa17.77■□□□□ 0.44
PNKP-230ENST00000638016 FAM208BQ5VWN6 2430 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 YY2O15391 372 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 OPA1O60313 960 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 HEXIM1O94992 359 aaKnown RBP17.76■□□□□ 0.43
PNKP-230ENST00000638016 MT-CO3P00414 261 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 ETV3P41162 512 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 PEX5P50542 639 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 SRP54P61011 504 aaKnown RBP17.76■□□□□ 0.43
PNKP-230ENST00000638016 POLR2LP62875 67 aaKnown RBP17.76■□□□□ 0.43
PNKP-230ENST00000638016 NIPAL4Q0D2K0 466 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 KIF26BQ2KJY2 2108 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 SARM1Q6SZW1 724 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 NPNTQ6UXI9 565 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 EFL1Q7Z2Z2 1120 aaKnown RBP17.76■□□□□ 0.43
PNKP-230ENST00000638016 CNGA4Q8IV77 575 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 DCBLD1Q8N8Z6 715 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 PTCD2Q8WV60 388 aaKnown RBP17.76■□□□□ 0.43
PNKP-230ENST00000638016 BTN2A2Q8WVV5 523 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 PIH1D2Q8WWB5 315 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 NUS1Q96E22 293 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 WDR92Q96MX6 357 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 RNF157Q96PX1 679 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 LGMNQ99538 433 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 BOCQ9BWV1 1114 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 CEP41Q9BYV8 373 aa17.76■□□□□ 0.43
PNKP-230ENST00000638016 RBM22Q9NW64 420 aaKnown RBP eCLIP17.76■□□□□ 0.43
PNKP-230ENST00000638016 ARHGEF17Q96PE2 2063 aaPredicted RBP17.76■□□□□ 0.43
PNKP-230ENST00000638016 CFAP69A5D8W1 941 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 LMO7DNF2Z398 122 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 KCNK1O00180 336 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 MATN3O15232 486 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 FZD6O60353 706 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 MTA2O94776 668 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 KRT1P04264 644 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 ANXA6P08133 673 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 CDK4P11802 303 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 TGM2P21980 687 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 ZBTB17Q13105 803 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 LLGL1Q15334 1064 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 IFI16Q16666 785 aaKnown RBP17.75■□□□□ 0.43
PNKP-230ENST00000638016 C6orf132Q5T0Z8 1188 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 ARMC12Q5T9G4 340 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 CDCP2Q5VXM1 449 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 ARRDC2Q8TBH0 407 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 SPOCK2Q92563 424 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 RNF25Q96BH1 459 aaPredicted RBP17.75■□□□□ 0.43
PNKP-230ENST00000638016 POLR1EQ9GZS1 481 aaKnown RBP17.75■□□□□ 0.43
PNKP-230ENST00000638016 RBSNQ9H1K0 784 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 SUDS3Q9H7L9 328 aaPredicted RBP17.75■□□□□ 0.43
PNKP-230ENST00000638016 CD84Q9UIB8 345 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 PHTF1Q9UMS5 762 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 CHKBQ9Y259 395 aa17.75■□□□□ 0.43
PNKP-230ENST00000638016 ADAMTS20P59510 1910 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 TOR1BO14657 336 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 TPP1O14773 563 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 RASGRP1O95267 797 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 CCNB1P14635 433 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 HTR1BP28222 390 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 DYNLT1P63172 113 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 E2F1Q01094 437 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 NR0B2Q15466 257 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 TIGD7Q6NT04 549 aaPredicted RBP17.74■□□□□ 0.43
PNKP-230ENST00000638016 ESRP1Q6NXG1 681 aaKnown RBP17.74■□□□□ 0.43
PNKP-230ENST00000638016 PNCKQ6P2M8 343 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 Q6ZVL8 140 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 MAP7D3Q8IWC1 876 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 RHOT2Q8IXI1 618 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 KYQ8NBH2 561 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 CCNYQ8ND76 341 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 CCL4L1Q8NHW4 92 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 MAPK15Q8TD08 544 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 HDAC11Q96DB2 347 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 DTD2Q96FN9 168 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 TSGA13Q96PP4 275 aa17.74■□□□□ 0.43
PNKP-230ENST00000638016 MCCC1Q96RQ3 725 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms