RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SNRPAP09012 282 aaKnown RBP11.8□□□□□ -0.52
CLN6-223ENST00000637823 CTPS1P17812 591 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 NFKBIAP25963 317 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 HNF1BP35680 557 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 ZNF140P52738 457 aaPredicted RBP11.8□□□□□ -0.52
CLN6-223ENST00000637823 CSE1LP55060 971 aaKnown RBP11.8□□□□□ -0.52
CLN6-223ENST00000637823 PRAMEP78395 509 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 ENPP2Q13822 863 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 ZNF805Q5CZA5 627 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 NEPROQ6NW34 567 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 TPRG1Q6ZUI0 275 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 CNTN4Q8IWV2 1026 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 LMNTD2Q8IXW0 634 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 STK40Q8N2I9 435 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 ZNF366Q8N895 744 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 CALML6Q8TD86 181 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 HDAC10Q969S8 669 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 MTBPQ96DY7 904 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 SCRN2Q96FV2 425 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 LYSMD1Q96S90 227 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 FAM167BQ9BTA0 163 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 GPR63Q9BZJ6 419 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 MFSD1Q9H3U5 465 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 MTG2Q9H4K7 406 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 UGT1A7Q9HAW7 530 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 UGT1A10Q9HAW8 530 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 UGT1A8Q9HAW9 530 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 IL1RAPL1Q9NZN1 696 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 SENP1Q9P0U3 644 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 TXNDC16Q9P2K2 825 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 HCN2Q9UL51 889 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 ZNF711Q9Y462 761 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 ACTL7BQ9Y614 415 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 F5P12259 2224 aa11.8□□□□□ -0.52
CLN6-223ENST00000637823 CAPN8A6NHC0 703 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 LOC730098B7Z3J9 87 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 AURKAO14965 403 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 FAM155BO75949 473 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 CTSLP07711 333 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 ALPIP09923 528 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 HLA-EP13747 358 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 TIMP2P16035 220 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 KRT15P19012 456 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 DRD1P21728 446 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 ARNTP27540 789 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 SPRP35270 261 aaPredicted RBP11.79□□□□□ -0.52
CLN6-223ENST00000637823 HMGCLP35914 325 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 GP5P40197 560 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 HADHAP40939 763 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 IL12RB1P42701 662 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 KIR2DL1P43626 348 aaPredicted RBP11.79□□□□□ -0.52
CLN6-223ENST00000637823 ILF2Q12905 390 aaKnown RBP11.79□□□□□ -0.52
CLN6-223ENST00000637823 DNAJC3Q13217 504 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 TDGQ13569 410 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 ELAVL3Q14576 367 aaKnown RBP11.79□□□□□ -0.52
CLN6-223ENST00000637823 CDKN3Q16667 212 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 UGP2Q16851 508 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 TMEM196Q5HYL7 178 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 EMC10Q5UCC4 262 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 EGFLAMQ63HQ2 1017 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 PACS1Q6VY07 963 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 KIAA0408Q6ZU52 694 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 USP45Q70EL2 814 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 STRA8Q7Z7C7 330 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 DSG4Q86SJ6 1040 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 TRABD2AQ86V40 505 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 EXOC3L1Q86VI1 746 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 ZSWIM9Q86XI8 627 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 OR4K2Q8NGD2 314 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 OR13C4Q8NGS5 318 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 GPR150Q8NGU9 434 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 OR6P1Q8NGX9 317 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 FAM76AQ8TAV0 307 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 GRIN3AQ8TCU5 1115 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 MSANTD3Q96H12 275 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 CDKN2AIPNLQ96HQ2 116 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 SGSM3Q96HU1 749 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 DNAJC1Q96KC8 554 aaKnown RBP11.79□□□□□ -0.52
CLN6-223ENST00000637823 TBATAQ96M53 351 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 SMIM14Q96QK8 99 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 MCCC1Q96RQ3 725 aaPredicted RBP11.79□□□□□ -0.52
CLN6-223ENST00000637823 FAM129BQ96TA1 746 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 AGAP2Q99490 1192 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 ZFYVE1Q9HBF4 777 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 PRSS16Q9NQE7 514 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 SLC2A4RGQ9NR83 387 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 HEBP1Q9NRV9 189 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 IL17CQ9P0M4 197 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 PPM1HQ9ULR3 514 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 PKP3Q9Y446 797 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 PSAT1Q9Y617 370 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 STON1Q9Y6Q2 735 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 PIAS3Q9Y6X2 628 aa11.79□□□□□ -0.52
CLN6-223ENST00000637823 LRRK1Q38SD2 2015 aa11.78□□□□□ -0.52
CLN6-223ENST00000637823 C1orf232A0A0U1RR37 186 aa11.78□□□□□ -0.52
CLN6-223ENST00000637823 CCDC162PA2VCL2 907 aa11.78□□□□□ -0.52
CLN6-223ENST00000637823 C16orf96A6NNT2 1141 aa11.78□□□□□ -0.52
CLN6-223ENST00000637823 UPK3BL1B0FP48 263 aa11.78□□□□□ -0.52
CLN6-223ENST00000637823 UPK3BL2E5RIL1 263 aa11.78□□□□□ -0.52
CLN6-223ENST00000637823 CD3EAPO15446 510 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms