RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PDK2Q15119 407 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 ODF2Q5BJF6 829 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 C6orf132Q5T0Z8 1188 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 TMCO3Q6UWJ1 677 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 RD3Q7Z3Z2 195 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 POLNQ7Z5Q5 900 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 MAP7D3Q8IWC1 876 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 KCTD6Q8NC69 237 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 DENND6BQ8NEG7 585 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 WDR36Q8NI36 951 aaKnown RBP15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 CXorf40AQ8TE69 158 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 ASB12Q8WXK4 309 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 NAT6Q93015 286 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 HMCESQ96FZ2 354 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 CALR3Q96L12 384 aaKnown RBP15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 CSPG4P5Q96PW8 444 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 LRRC61Q9BV99 259 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 C1QTNF7Q9BXJ2 289 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 OSBPL1AQ9BXW6 950 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 CLPBQ9H078 707 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 SIRPGQ9P1W8 387 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 RCOR3Q9P2K3 495 aaPredicted RBP15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 REXO2Q9Y3B8 237 aaKnown RBP15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 PCDHGA8Q9Y5G5 932 aa15.68■□□□□ 0.1
SNRNP48-203ENST00000634363 CXorf51AA0A1B0GTR3 108 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 ARHGAP42A6NI28 874 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 B8ZZF3 427 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 LMO7DNF2Z398 122 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 K7ENP7 123 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 LZTS3O60299 673 aaPredicted RBP15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 BUB1BO60566 1050 aaPredicted RBP15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 GSRP00390 522 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 CELA2BP08218 269 aaPredicted RBP15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 C6P13671 934 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 CTSEP14091 401 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 SERPINB6P35237 376 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 YPEL5P62699 121 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 INO80CQ6PI98 192 aaPredicted RBP15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 IGF2-ASQ6U949 168 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 HID1Q8IV36 788 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 LZTR1Q8N653 840 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 TTC9Q92623 222 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 TSACCQ96A04 125 aaPredicted RBP15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 CELF6Q96J87 481 aaKnown RBP15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 ZNF670Q9BS34 389 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 DESI2Q9BSY9 194 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 NOL6Q9H6R4 1146 aaKnown RBP15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 COQ6Q9Y2Z9 468 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 CHD5Q8TDI0 1954 aa15.67■□□□□ 0.1
SNRNP48-203ENST00000634363 MGAQ8IWI9 3026 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 CCDC187A0A096LP49 1063 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 CDRT15L2A8MXV6 281 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 AGRPO00253 132 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 RIOK3O14730 519 aaKnown RBP15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 AREL1O15033 823 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 ARHGAP6O43182 974 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 KDELR3O43731 214 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 TNNT1P13805 278 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 COMTP21964 271 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 XPAP23025 273 aaPredicted RBP15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 AMPD1P23109 780 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 KIF5AQ12840 1032 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 ATP13A4Q4VNC1 1196 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 LRRC38Q5VT99 294 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 C11orf63Q6NUN7 778 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 DAAM2Q86T65 1068 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 RHOT1Q8IXI2 618 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 WDR48Q8TAF3 677 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 SCG3Q8WXD2 468 aaKnown RBP15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 GDAP1L1Q96MZ0 367 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 LRRC19Q9H756 370 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 EPB41L5Q9HCM4 733 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 HYOU1Q9Y4L1 999 aa15.66■□□□□ 0.1
SNRNP48-203ENST00000634363 SETXQ7Z333 2677 aaKnown RBP15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 LRRD1A4D1F6 860 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 RCCD1A6NED2 376 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 BTNL10A8MVZ5 291 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 DFFAO00273 331 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 PJA2O43164 708 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 TMCC1O94876 653 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 KRT1P04264 644 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 CD48P09326 243 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 TIMP2P16035 220 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 BLKP51451 505 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 RHOAP61586 193 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 MMRN1Q13201 1228 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 CLN3Q13286 438 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 SERINC3Q13530 473 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 DPYSL3Q14195 570 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 IFI16Q16666 785 aaKnown RBP15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 ENPP7Q6UWV6 458 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 MACC1Q6ZN28 852 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 JAMLQ86YT9 394 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 LRRC8AQ8IWT6 810 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 FBXO39Q8N4B4 442 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 NPWQ8N729 165 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 TP53I13Q8NBR0 393 aaPredicted RBP15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 FAM71BQ8TC56 605 aa15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 SNRNP27Q8WVK2 155 aaKnown RBP15.65■□□□□ 0.1
SNRNP48-203ENST00000634363 MED8Q96G25 268 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms