RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 HNRNPH1P31943 449 aaKnown RBP3.37□□□□□ -1.87
VBP1-204ENST00000625964 STX2P32856 288 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 EEF1A2Q05639 463 aaKnown RBP3.37□□□□□ -1.87
VBP1-204ENST00000625964 DLG1Q12959 904 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 PWP2Q15269 919 aaKnown RBP3.37□□□□□ -1.87
VBP1-204ENST00000625964 SETMARQ53H47 684 aaPredicted RBP3.37□□□□□ -1.87
VBP1-204ENST00000625964 TXNDC8Q6A555 127 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 FBXO46Q6PJ61 603 aaPredicted RBP3.37□□□□□ -1.87
VBP1-204ENST00000625964 B3GNT6Q6ZMB0 384 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 SLC35F3Q8IY50 421 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 DSELQ8IZU8 1212 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 ZNF114Q8NC26 417 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 AGBL3Q8NEM8 1001 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 BEST2Q8NFU1 509 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 CREB3L4Q8TEY5 395 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 SCMH1Q96GD3 660 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 DUX5Q96PT3 197 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 H2AFJQ9BTM1 129 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 PDP2Q9P2J9 529 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 SLCO3A1Q9UIG8 710 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 KCNG2Q9UJ96 466 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 A4GNTQ9UNA3 340 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 GTF2A1LQ9UNN4 478 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 LSM4Q9Y4Z0 139 aaKnown RBP3.37□□□□□ -1.87
VBP1-204ENST00000625964 CYP46A1Q9Y6A2 500 aa3.37□□□□□ -1.87
VBP1-204ENST00000625964 SCN5AQ14524 2016 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 A0A1B0GUV1 79 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 TTC36A6NLP5 189 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 LDLRAD4O15165 306 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 SLC16A5O15375 505 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 NDUFS7O75251 213 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 GAGE7O76087 117 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 KDM4BO94953 1096 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 GAGE12FP0CL80 117 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 GAGE12GP0CL81 117 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 GAGE12IP0CL82 117 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 ABCD1P33897 745 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 EIF2S3P41091 472 aaKnown RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 CTCFP49711 727 aaPredicted RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 GNAQP50148 359 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 TUBP50607 506 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 ERVFC1-1P60608 527 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 FOXD4Q12950 439 aaPredicted RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 GAGE1Q13065 139 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 GAGE4Q13068 117 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 AMZ1Q400G9 498 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 PPP6R3Q5H9R7 873 aaPredicted RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 SLC46A3Q7Z3Q1 461 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 ZBTB2Q8N680 514 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 PABPC5Q96DU9 382 aaKnown RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 RRP36Q96EU6 259 aaKnown RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 C3orf30Q96M34 536 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 KXD1Q9BQD3 176 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 EIF2AK1Q9BQI3 630 aaKnown RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 PAIP1Q9H074 479 aaKnown RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 GAREM1Q9H706 876 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 DDX31Q9H8H2 851 aaKnown RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 CNGB3Q9NQW8 809 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 FBXO9Q9UK97 447 aaPredicted RBP3.36□□□□□ -1.87
VBP1-204ENST00000625964 RCOR1Q9UKL0 485 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 CAMK2AQ9UQM7 478 aa3.36□□□□□ -1.87
VBP1-204ENST00000625964 ATXN2Q99700 1313 aaKnown RBP3.35□□□□□ -1.87
VBP1-204ENST00000625964 SAA2-SAA4A0A096LPE2 208 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 A0A0B4J293 547 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 A0A1B0GVY2 172 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 CPED1A4D0V7 1026 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 PLEKHD1A6NEE1 506 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 TMEM202A6NGA9 273 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 A6NLC8 198 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 SOCS6O14544 535 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 CLGNO14967 610 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 TNFSF14O43557 240 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 AGR2O95994 175 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 F9P00740 461 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 CYC1P08574 325 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 SNRNP70P08621 437 aaKnown RBP3.35□□□□□ -1.87
VBP1-204ENST00000625964 G6PDP11413 515 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 SHMT1P34896 483 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 ARL1P40616 181 aaPredicted RBP3.35□□□□□ -1.87
VBP1-204ENST00000625964 GABRB2P47870 512 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 SORDQ00796 357 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 PRICKLE4Q2TBC4 344 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 KRTAP24-1Q3LI83 254 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 ATP13A5Q4VNC0 1218 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 SGO1Q5FBB7 561 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 PAPPA-AS1Q5QFB9 102 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 ANKRD54Q6NXT1 300 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 WDR73Q6P4I2 378 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 MTSS1LQ765P7 747 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 LINGO2Q7L985 606 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 CADM4Q8NFZ8 388 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 HUS1BQ8NHY5 278 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 NFKBIDQ8NI38 313 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 BICD1Q96G01 975 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 HAUS8Q9BT25 410 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 GLIS2Q9BZE0 524 aaPredicted RBP3.35□□□□□ -1.87
VBP1-204ENST00000625964 TKTL2Q9H0I9 626 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 GPR108Q9NPR9 543 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 ZNF224Q9NZL3 707 aa3.35□□□□□ -1.87
VBP1-204ENST00000625964 STON1Q9Y6Q2 735 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms