RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SCRN2Q96FV2 425 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 TBATAQ96M53 351 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 CNTNAP3BQ96NU0 1288 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 APOOQ9BUR5 198 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 CNTNAP3Q9BZ76 1288 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 B4GALT6Q9UBX8 382 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 KLQ9UEF7 1012 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 RPL26L1Q9UNX3 145 aaKnown RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 CCDC66A2RUB6 948 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 A8MX80 341 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 CST8O60676 142 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 ZNF189O75820 626 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 TNFP01375 233 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 JCHAINP01591 159 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 TSHRP16473 764 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 VAV2P52735 878 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 TRAF2Q12933 501 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 PEX6Q13608 980 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 INPP5AQ14642 412 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 WSCD2Q2TBF2 565 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 PRRT3Q5FWE3 981 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 ESRP1Q6NXG1 681 aaKnown RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 SPOCD1Q6ZMY3 1216 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 ZSWIM9Q86XI8 627 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 GKN2Q86XP6 184 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 HID1Q8IV36 788 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 KATNAL2Q8IYT4 538 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 SDR16C5Q8N3Y7 309 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 PLD5Q8N7P1 536 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 ZNF548Q8NEK5 533 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 EXD1Q8NHP7 514 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 CCHCR1Q8TD31 782 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 TFB1MQ8WVM0 346 aaKnown RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 LRRC45Q96CN5 670 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 WDR92Q96MX6 357 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 WDR26Q9H7D7 661 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 MBNL1Q9NR56 388 aaKnown RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 PHPT1Q9NRX4 125 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-208ENST00000612050 GPR27Q9NS67 375 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 HYOU1Q9Y4L1 999 aa12.37□□□□□ -0.43
CBWD3-208ENST00000612050 TDRD6O60522 2096 aaKnown RBP12.36□□□□□ -0.43
CBWD3-208ENST00000612050 TTC24A2A3L6 582 aaPredicted RBP12.36□□□□□ -0.43
CBWD3-208ENST00000612050 BTNL10A8MVZ5 291 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 KCNK1O00180 336 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 TPP1O14773 563 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 SIGLEC6O43699 453 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 HEXIM1O94992 359 aaKnown RBP12.36□□□□□ -0.43
CBWD3-208ENST00000612050 HLA-DQB2P05538 268 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 JUPP14923 745 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 SPINK2P20155 84 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 FECHP22830 423 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 COPS2P61201 443 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 SEMG2Q02383 582 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 DSC2Q02487 901 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 ALG1LQ6GMV1 187 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 MFSD7Q6UXD7 560 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 RD3Q7Z3Z2 195 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 SLCO6A1Q86UG4 719 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 TMPRSS12Q86WS5 348 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 GAS2L3Q86XJ1 694 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 UBL4BQ8N7F7 174 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 HAUS1Q96CS2 278 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 SRPK1Q96SB4 655 aaKnown RBP12.36□□□□□ -0.43
CBWD3-208ENST00000612050 LGMNQ99538 433 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 TDRD1Q9BXT4 1180 aaKnown RBP12.36□□□□□ -0.43
CBWD3-208ENST00000612050 PCDH9Q9HC56 1237 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 MOSPD1Q9UJG1 213 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 KLK13Q9UKR3 277 aa12.36□□□□□ -0.43
CBWD3-208ENST00000612050 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 LRRK1Q38SD2 2015 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 MACROD2A1Z1Q3 448 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 STK10O94804 968 aaKnown RBP12.35□□□□□ -0.43
CBWD3-208ENST00000612050 CTPS1P17812 591 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 ACP1P24666 158 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 CD86P42081 329 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 CDKN2BP42772 138 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 ACADVLP49748 655 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 HK3P52790 923 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 RWDD2BP57060 319 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 KIAA1024LP59773 190 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 SRP54P61011 504 aaKnown RBP12.35□□□□□ -0.43
CBWD3-208ENST00000612050 RALGDSQ12967 914 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 DNAJC3Q13217 504 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 CNGA3Q16281 694 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 PPP2R5EQ16537 467 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 ST3GAL2Q16842 350 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 RAET1GQ6H3X3 334 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 DHRS13Q6UX07 377 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 TMPRSS7Q7RTY8 843 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 RAVER1Q8IY67 606 aaKnown RBP12.35□□□□□ -0.43
CBWD3-208ENST00000612050 SLC25A45Q8N413 288 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 LPCAT1Q8NF37 534 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 OR56A4Q8NGH8 313 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 VOPP1Q96AW1 172 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 AGAP3Q96P47 875 aa12.35□□□□□ -0.43
CBWD3-208ENST00000612050 VAT1Q99536 393 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms